Files in macs3-project/MACSr

MACS: Model-based Analysis for ChIP-Seq

.BBSoptions

.Rbuildignore

.github/.gitignore

.github/workflows/R-CMD-check.yaml

.gitignore

DESCRIPTION

LICENSE

NAMESPACE

NEWS

R/AllClasses.R R/MACSr-package.R R/basilisk.R R/bdgbroadcall.R R/bdgcmp.R R/bdgdiff.R R/bdgopt.R R/bdgpeakcall.R R/callpeak.R R/callvar.R R/cmbreps.R R/filterdup.R R/hmmratac.R R/pileup.R R/predictd.R R/python.R R/randsample.R R/refinepeak.R README.md

_pkgdown.yml

configure

configure.win

docs/404.html

docs/LICENSE-text.html

docs/articles/MACSr.html

docs/articles/index.html

docs/authors.html

docs/bootstrap-toc.css

docs/bootstrap-toc.js

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/link.svg

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/MACSr.html

docs/reference/Rplot001.png

docs/reference/bdgbroadcall.html

docs/reference/bdgcmp.html

docs/reference/bdgdiff.html

docs/reference/bdgopt.html

docs/reference/bdgpeakcall.html

docs/reference/callpeak.html

docs/reference/callvar.html

docs/reference/cmbreps.html

docs/reference/filterdup.html

docs/reference/hmmratac.html

docs/reference/index.html

docs/reference/macsList-class.html

docs/reference/pileup.html

docs/reference/predictd.html

docs/reference/randsample.html

docs/reference/refinepeak.html

inst/extdata/run_callpeak_bampe_broad_peaks.broadPeak

inst/extdata/run_callpeak_bampe_narrow_peaks.narrowPeak

inst/extdata/run_callpeak_bedpe_broad_peaks.broadPeak

inst/extdata/run_callpeak_bedpe_narrow_peaks.narrowPeak

inst/extdata/run_callpeak_broad_peaks.broadPeak

inst/extdata/run_callpeak_narrow0_peaks.narrowPeak

inst/extdata/run_callpeak_narrow1_peaks.narrowPeak

inst/extdata/run_callpeak_narrow2_peaks.narrowPeak

inst/extdata/run_callpeak_narrow3_peaks.narrowPeak

inst/extdata/run_callpeak_narrow4_peaks.narrowPeak

inst/extdata/run_callpeak_narrow5_peaks.narrowPeak

inst/extdata/run_callpeak_pe_narrow_onlychip_peaks.narrowPeak

inst/extdata/run_filterdup_result.bed.gz

man/MACSr.Rd man/bdgbroadcall.Rd man/bdgcmp.Rd man/bdgdiff.Rd man/bdgopt.Rd man/bdgpeakcall.Rd man/callpeak.Rd man/callvar.Rd man/cmbreps.Rd man/filterdup.Rd man/hmmratac.Rd man/macsList-class.Rd man/pileup.Rd man/predictd.Rd man/randsample.Rd man/refinepeak.Rd tests/testthat.R tests/testthat/test-init.R

tests/testthat/test.py

vignettes/.gitignore

vignettes/MACSr.Rmd

macs3-project/MACSr documentation built on Nov. 24, 2023, 12:47 p.m.