magStra/nonparametricSummaryPSM: Nonparametric methods to find optimal weights to combine posterior similarity matrices

Compute summary PSMs (posterior similarity matrices) from a set of multiple PSMs obtained for instance by means of subsampling. Implementation of the Dirichlet process and Pitman-Yor process based methods for combining PSMs proposed in Strauss et al. (2019). GPseudoClust: deconvolution of shared pseudo-trajectories at single-cell resolution.

Getting started

Package details

AuthorMagdalena Strauss
MaintainerMagdalena Strauss <ms58@sanger.ac.uk>
LicenseGPL-3
Version0.1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("magStra/nonparametricSummaryPSM")
magStra/nonparametricSummaryPSM documentation built on July 15, 2019, 5:59 p.m.