Man pages for marianschmidt/msSPChelpR
Helper Functions for Second Primary Cancer Analyses

asirCalculate age-standardized incidence rates
calc_futimeCalculate follow-up time per case until end of follow-up...
calc_futime_ttCalculate follow-up time per case until end of follow-up...
calc_refratesCalculate age-, sex-, cohort-, region-specific incidence...
histgroup_iarcCreate variable for groups of malignant neoplasms considered...
ir_crosstabCalculate crude incidence rates and crosstabulate results by...
ir_crosstab_byfutimeCalculate crude incidence rates and cross-tabulate results by...
msSPChelpRmsSPChelpR
msSPChelpR-packagemsSPChelpR: Helper Functions for Second Primary Cancer...
pat_statusDetermine patient status at specific end of follow-up -...
pat_status_ttDetermine patient status at specific end of follow-up -...
pipePipe operator
population_usUS Populations Data
renumber_time_idRenumber the time ID per case (i.e. Tumor sequence)
renumber_time_id_ttRenumber the time ID per case (i.e. Tumor sequence) -...
reshape_longReshape dataset to long format - stats::reshape version
reshape_long_tidyrReshape dataset to wide format - tidyr version
reshape_long_ttReshape dataset to wide format - tidytable version
reshape_wideReshape dataset to wide format
reshape_wide_tidyrReshape dataset to wide format - tidyr version
reshape_wide_ttReshape dataset to wide format - tidytable version
sir_byfutimeCalculate standardized incidence ratios with custom grouping...
sir_ratioCalculate Ratio of two SIRs or SMRs
standard_populationStandard Populations Data
summarize_sir_resultsSummarize detailed SIR results
us_refrates_icd2US Reference Rates for Cancer Data (ICD-O 2digit code)
us_second_cancerUS Second Cancer Data
vital_statusDetermine vital status at end of follow-up depending on...
vital_status_ttDetermine vital status at end of follow-up depending on...
marianschmidt/msSPChelpR documentation built on Feb. 1, 2024, 6:45 a.m.