network_genes: network_genes
In markziemann/mitch: Multi-Contrast Gene Set Enrichment Analysis
network_genes R Documentation
network_genes
Description
This is a companion function for the network diagrams to display the genes which contribute
to the enrichment and are shared between gene sets.
Usage
network_genes(eres, FDR = 0.05, n_sets = 20)
Arguments
eres
a mitch results object.
FDR
the significance threshold for inclusion. By default, it is 0.05
n_sets
the number of sets to include.
Value
a list of up- and down-regulated gene sets
Examples
data(resExample)
network_genes(resExample)
markziemann/mitch documentation built on April 12, 2025, 3:47 p.m.
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| network_genes | R Documentation |
network_genes
Description
This is a companion function for the network diagrams to display the genes which contribute to the enrichment and are shared between gene sets.
Usage
network_genes(eres, FDR = 0.05, n_sets = 20)
Arguments
eres |
a mitch results object. |
FDR |
the significance threshold for inclusion. By default, it is 0.05 |
n_sets |
the number of sets to include. |
Value
a list of up- and down-regulated gene sets
Examples
data(resExample)
network_genes(resExample)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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