Files in masato-ogishi/GramStainR
Automatic classification of digital Gram stain images
.Rbuildignore
.gitignore
DESCRIPTION
GramStainR.Rproj
Images/ClinicalImages/Ecoli00201.JPG
Images/ClinicalImages/Ecoli00202.JPG
Images/ClinicalImages/Ecoli00203.JPG
Images/ClinicalImages/Ecoli00204.JPG
Images/ClinicalImages/Ecoli00205.JPG
Images/ClinicalImages/Ecoli00206.JPG
Images/ClinicalImages/Ecoli00207.JPG
Images/ClinicalImages/Ecoli00208.JPG
Images/ClinicalImages/Ecoli00209.JPG
Images/ClinicalImages/Ecoli00210.JPG
Images/ClinicalImages/Ecoli00301.JPG
Images/ClinicalImages/Ecoli00302.JPG
Images/ClinicalImages/Ecoli00303.JPG
Images/ClinicalImages/Ecoli00304.JPG
Images/ClinicalImages/Ecoli00305.JPG
Images/ClinicalImages/Ecoli00306.JPG
Images/ClinicalImages/Ecoli00307.JPG
Images/ClinicalImages/Ecoli00308.JPG
Images/ClinicalImages/Ecoli00309.JPG
Images/ClinicalImages/Ecoli00310.JPG
Images/ClinicalImages/Ecoli00401.JPG
Images/ClinicalImages/Ecoli00402.JPG
Images/ClinicalImages/Ecoli00403.JPG
Images/ClinicalImages/Ecoli00404.JPG
Images/ClinicalImages/Ecoli00405.JPG
Images/ClinicalImages/Ecoli00406.JPG
Images/ClinicalImages/Ecoli00407.JPG
Images/ClinicalImages/Ecoli00408.JPG
Images/ClinicalImages/Ecoli00409.JPG
Images/ClinicalImages/Ecoli00410.JPG
Images/ClinicalImages/Ecoli00501.JPG
Images/ClinicalImages/Ecoli00502.JPG
Images/ClinicalImages/Ecoli00503.JPG
Images/ClinicalImages/Ecoli00504.JPG
Images/ClinicalImages/Ecoli00505.JPG
Images/ClinicalImages/Ecoli00506.JPG
Images/ClinicalImages/Ecoli00507.JPG
Images/ClinicalImages/Ecoli00508.JPG
Images/ClinicalImages/Ecoli00509.JPG
Images/ClinicalImages/Ecoli00510.JPG
Images/ClinicalImages/Ecoli00601.JPG
Images/ClinicalImages/Ecoli00602.JPG
Images/ClinicalImages/Ecoli00603.JPG
Images/ClinicalImages/Ecoli00604.JPG
Images/ClinicalImages/Ecoli00605.JPG
Images/ClinicalImages/Ecoli00606.JPG
Images/ClinicalImages/Ecoli00607.JPG
Images/ClinicalImages/Ecoli00608.JPG
Images/ClinicalImages/Ecoli00609.JPG
Images/ClinicalImages/Ecoli00610.JPG
Images/ClinicalImages/Ecoli00701.JPG
Images/ClinicalImages/Ecoli00702.JPG
Images/ClinicalImages/Ecoli00703.JPG
Images/ClinicalImages/Ecoli00704.JPG
Images/ClinicalImages/Ecoli00705.JPG
Images/ClinicalImages/Ecoli00706.JPG
Images/ClinicalImages/Ecoli00707.JPG
Images/ClinicalImages/Ecoli00708.JPG
Images/ClinicalImages/Ecoli00709.JPG
Images/ClinicalImages/Ecoli00710.JPG
Images/ClinicalImages/Ecoli00711.JPG
Images/ClinicalImages/Ecoli00801.JPG
Images/ClinicalImages/Ecoli00802.JPG
Images/ClinicalImages/Ecoli00803.JPG
Images/ClinicalImages/Ecoli00804.JPG
Images/ClinicalImages/Ecoli00805.JPG
Images/ClinicalImages/Ecoli00806.JPG
Images/ClinicalImages/Ecoli00807.JPG
Images/ClinicalImages/Ecoli00808.JPG
Images/ClinicalImages/Ecoli00809.JPG
Images/ClinicalImages/Ecoli00810.JPG
Images/ClinicalImages/Paeruginosa00101.JPG
Images/ClinicalImages/Paeruginosa00102.JPG
Images/ClinicalImages/Paeruginosa00103.JPG
Images/ClinicalImages/Paeruginosa00104.JPG
Images/ClinicalImages/Paeruginosa00105.JPG
Images/ClinicalImages/Paeruginosa00201.JPG
Images/ClinicalImages/Paeruginosa00202.JPG
Images/ClinicalImages/Paeruginosa00203.JPG
Images/ClinicalImages/Paeruginosa00204.JPG
Images/ClinicalImages/Paeruginosa00205.JPG
Images/ClinicalImages/Paeruginosa00206.JPG
Images/ClinicalImages/Paeruginosa00207.JPG
Images/ClinicalImages/Paeruginosa00208.JPG
Images/ClinicalImages/Paeruginosa00209.JPG
Images/ClinicalImages/Paeruginosa00210.JPG
Images/ClinicalImages/Paeruginosa00211.JPG
Images/ClinicalImages/Paeruginosa00301.JPG
Images/ClinicalImages/Paeruginosa00302.JPG
Images/ClinicalImages/Paeruginosa00303.JPG
Images/ClinicalImages/Paeruginosa00304.JPG
Images/ClinicalImages/Paeruginosa00305.JPG
Images/ClinicalImages/Paeruginosa00306.JPG
Images/ClinicalImages/Paeruginosa00307.JPG
Images/ClinicalImages/Paeruginosa00308.JPG
Images/ClinicalImages/Paeruginosa00309.JPG
Images/ClinicalImages/Paeruginosa00310.JPG
Images/DIBaSImages/Bfragilis0001.jpg
Images/DIBaSImages/Bfragilis0002.jpg
Images/DIBaSImages/Bfragilis0003.jpg
Images/DIBaSImages/Bfragilis0004.jpg
Images/DIBaSImages/Bfragilis0005.jpg
Images/DIBaSImages/Bfragilis0006.jpg
Images/DIBaSImages/Bfragilis0007.jpg
Images/DIBaSImages/Bfragilis0008.jpg
Images/DIBaSImages/Bfragilis0009.jpg
Images/DIBaSImages/Bfragilis0010.jpg
Images/DIBaSImages/Bfragilis0011.jpg
Images/DIBaSImages/Bfragilis0012.jpg
Images/DIBaSImages/Bfragilis0013.jpg
Images/DIBaSImages/Bfragilis0014.jpg
Images/DIBaSImages/Bfragilis0015.jpg
Images/DIBaSImages/Bfragilis0016.jpg
Images/DIBaSImages/Bfragilis0017.jpg
Images/DIBaSImages/Bfragilis0018.jpg
Images/DIBaSImages/Bfragilis0019.jpg
Images/DIBaSImages/Bfragilis0020.jpg
Images/DIBaSImages/Bfragilis0021.jpg
Images/DIBaSImages/Bfragilis0022.jpg
Images/DIBaSImages/Bfragilis0023.jpg
Images/DIBaSImages/Ecoli0001.jpg
Images/DIBaSImages/Ecoli0002.jpg
Images/DIBaSImages/Ecoli0003.jpg
Images/DIBaSImages/Ecoli0004.jpg
Images/DIBaSImages/Ecoli0005.jpg
Images/DIBaSImages/Ecoli0006.jpg
Images/DIBaSImages/Ecoli0007.jpg
Images/DIBaSImages/Ecoli0008.jpg
Images/DIBaSImages/Ecoli0009.jpg
Images/DIBaSImages/Ecoli0010.jpg
Images/DIBaSImages/Ecoli0011.jpg
Images/DIBaSImages/Ecoli0012.jpg
Images/DIBaSImages/Ecoli0013.jpg
Images/DIBaSImages/Ecoli0014.jpg
Images/DIBaSImages/Ecoli0015.jpg
Images/DIBaSImages/Ecoli0016.jpg
Images/DIBaSImages/Ecoli0017.jpg
Images/DIBaSImages/Ecoli0018.jpg
Images/DIBaSImages/Ecoli0019.jpg
Images/DIBaSImages/Ecoli0020.jpg
Images/DIBaSImages/Paeruginosa0001.jpg
Images/DIBaSImages/Paeruginosa0002.jpg
Images/DIBaSImages/Paeruginosa0003.jpg
Images/DIBaSImages/Paeruginosa0004.jpg
Images/DIBaSImages/Paeruginosa0005.jpg
Images/DIBaSImages/Paeruginosa0006.jpg
Images/DIBaSImages/Paeruginosa0007.jpg
Images/DIBaSImages/Paeruginosa0008.jpg
Images/DIBaSImages/Paeruginosa0009.jpg
Images/DIBaSImages/Paeruginosa0010.jpg
Images/DIBaSImages/Paeruginosa0011.jpg
Images/DIBaSImages/Paeruginosa0012.jpg
Images/DIBaSImages/Paeruginosa0013.jpg
Images/DIBaSImages/Paeruginosa0014.jpg
Images/DIBaSImages/Paeruginosa0015.jpg
Images/DIBaSImages/Paeruginosa0016.jpg
Images/DIBaSImages/Paeruginosa0017.jpg
Images/DIBaSImages/Paeruginosa0018.jpg
Images/DIBaSImages/Paeruginosa0019.jpg
Images/DIBaSImages/Paeruginosa0020.jpg
Images/ReferenceImages/Ecoli001.JPG
Images/ReferenceImages/Ecoli002.JPG
Images/ReferenceImages/Ecoli003.JPG
Images/ReferenceImages/Ecoli004.JPG
Images/ReferenceImages/Ecoli005.JPG
Images/ReferenceImages/Ecoli006.JPG
Images/ReferenceImages/Ecoli007.JPG
Images/ReferenceImages/Ecoli008.JPG
Images/ReferenceImages/Ecoli009.JPG
Images/ReferenceImages/Ecoli010.JPG
Images/ReferenceImages/Ecoli011.JPG
Images/ReferenceImages/Ecoli012.JPG
Images/ReferenceImages/Ecoli013.JPG
Images/ReferenceImages/Ecoli014.JPG
Images/ReferenceImages/Ecoli015.JPG
Images/ReferenceImages/Ecoli016.JPG
Images/ReferenceImages/Ecoli017.JPG
Images/ReferenceImages/Ecoli018.JPG
Images/ReferenceImages/Ecoli019.JPG
Images/ReferenceImages/Ecoli020.JPG
Images/ReferenceImages/Ecoli021.JPG
Images/ReferenceImages/Ecoli022.JPG
Images/ReferenceImages/Ecoli023.JPG
Images/ReferenceImages/Ecoli024.JPG
Images/ReferenceImages/Ecoli025.JPG
Images/ReferenceImages/Ecoli026.JPG
Images/ReferenceImages/Ecoli027.JPG
Images/ReferenceImages/Ecoli028.JPG
Images/ReferenceImages/Ecoli029.JPG
Images/ReferenceImages/Ecoli030.JPG
Images/ReferenceImages/Paeruginosa001.JPG
Images/ReferenceImages/Paeruginosa002.JPG
Images/ReferenceImages/Paeruginosa003.JPG
Images/ReferenceImages/Paeruginosa004.JPG
Images/ReferenceImages/Paeruginosa005.JPG
Images/ReferenceImages/Paeruginosa006.JPG
Images/ReferenceImages/Paeruginosa007.JPG
Images/ReferenceImages/Paeruginosa008.JPG
Images/ReferenceImages/Paeruginosa009.JPG
Images/ReferenceImages/Paeruginosa010.JPG
Images/ReferenceImages/Paeruginosa011.JPG
Images/ReferenceImages/Paeruginosa012.JPG
Images/ReferenceImages/Paeruginosa013.JPG
Images/ReferenceImages/Paeruginosa014.JPG
Images/ReferenceImages/Paeruginosa015.JPG
Images/ReferenceImages/Paeruginosa016.JPG
Images/ReferenceImages/Paeruginosa017.JPG
Images/ReferenceImages/Paeruginosa018.JPG
Images/ReferenceImages/Paeruginosa019.JPG
Images/ReferenceImages/Paeruginosa020.JPG
Images/ReferenceImages/Paeruginosa021.JPG
Images/ReferenceImages/Paeruginosa022.JPG
Images/ReferenceImages/Paeruginosa023.JPG
Images/ReferenceImages/Paeruginosa024.JPG
Images/ReferenceImages/Paeruginosa025.JPG
Images/ReferenceImages/Paeruginosa026.JPG
Images/ReferenceImages/Paeruginosa027.JPG
Images/ReferenceImages/Paeruginosa028.JPG
Images/ReferenceImages/Paeruginosa029.JPG
Images/ReferenceImages/Paeruginosa030.JPG
LICENSE
NAMESPACE
R/bacteriaClassification.R
R/bacteriaDataFormat.R
R/bacteriaDetection.R
README.md
Results/LeaderBoard_DIBaS.csv
Results/LeaderBoard_Reference.csv
Results/Predictions_By_DIBaS_Clinical_Bacteria.csv
Results/Predictions_By_DIBaS_Clinical_Image.csv
Results/Predictions_By_DIBaS_DIBaS_Test.pdf
Results/Predictions_By_DIBaS_DIBaS_Test_Bacteria.csv
Results/Predictions_By_DIBaS_DIBaS_Test_Image.csv
Results/Predictions_By_DIBaS_Reference_Bacteria.csv
Results/Predictions_By_DIBaS_Reference_Image.csv
Results/Predictions_By_Reference_Clinical.pdf
Results/Predictions_By_Reference_Clinical_Bacteria.csv
Results/Predictions_By_Reference_Clinical_Image.csv
Results/Predictions_By_Reference_Reference_Test.pdf
Results/Predictions_By_Reference_Reference_Test_Bacteria.csv
Results/Predictions_By_Reference_Reference_Test_Image.csv
man/bacteriaClassification.Rd
man/bacteriaDataFormat.Rd
man/bacteriaDetection.Rd
