ggJitterPlot: Jitter plot with error bars.

In masato-ogishi/plotUtility: Utility functions for R graphics

Jitter plot with error bars.

Description

The error bar represents mean and SEM.

Usage

ggJitterPlot(
  df,
  x,
  y,
  fill,
  shape = NULL,
  facet = NULL,
  colors = NULL,
  shapes = NULL,
  add.violin = "auto",
  minN.violin = 10,
  ylab = "Y",
  yscale = "continuous",
  yscale.expand = F,
  facet_type = "wrap",
  facet_scales = "free_y",
  facet_space = "fixed",
  facet_ncol = NULL,
  facet_nrow = NULL
)

Arguments

df	A data.frame of plot data.
x	A string of the column name for x.
y	A string of the column name for y.
fill	A string of the column name for fill.
shape	(Optional) A string of the column name for shape.
facet	(Optional) A string or a pair of strings of the column name(s) for facet.
colors	(Optional) A vector of colors.
shapes	(Optional) A vector of point shapes. E.g., 21:25
add.violin	Logical. Whether a violin layer should be added. Default is "auto", in which case violin is generated when the maximal number of samples in a specific group >= minN.violin.
minN.violin	An integer. The minimum number of data points required to add a violin layer.
ylab	A string for y-axis label.
yscale	The y-axis scale. Can be either "continuous" or "log10".
yscale.expand	Logical. Whether the y-scale should be expanded down to zero.
facet_type	The facetting type. Can be either "wrap" or "grid".
facet_scales	The facetting scales.
facet_space	The spacing scheme in the facetting grid.
facet_ncol	Number of columns.
facet_nrow	Number of rows.

masato-ogishi/plotUtility documentation built on July 27, 2023, 11:37 a.m.