prob.heatmap.sdp: prob.heatmap.sdp

In mauriziopaul/PLMcctools: Collaborative Cross Tools

Description

This is an SDP-collapsed version of the miqtl::prob.heatmap function.

Usage

prob.heatmap.sdp(marker, p.value = NULL, genomecache, model = "additive",
  phenotype, phenotype.data, merge.by = "SUBJECT.NAME",
  founder.labels = NULL, founder.cex = 1, founder.line = 1,
  founder.col = rep("black", length(levels(as.factor(sdp)))),
  phenotype.lab.cex = 1, phenotype.num.cex = 1, phenotype.num.padj = NA,
  phenotype.line = NA, phenotype.num.line = NA, include.ramp = TRUE,
  ramp.label.cex = 0.7, ramp.label.line = 0.5, prob.axis.cex = 1,
  include.marker = TRUE, marker.line = 1,
  alternative.phenotype.label = NULL, alternative.marker.label = NULL,
  sdp = NULL)

Arguments

...	additional arguments

Value

Returns rescaled palette, with same length of colors as original scale

Examples

# Not Run

mauriziopaul/PLMcctools documentation built on May 20, 2019, 5:43 p.m.