plot_hpd: plot_hpd: Plot highest posterior density intervals

In mauriziopaul/litterDiallel: Litter Diallel

plot_hpd: Plot highest posterior density intervals

Description

Plot HPD intervals. (From the BayesDiallel package, Will Valdar and Alan Lenarcic).

Usage

plot_hpd(
  coda.object,
  wanted = coda::varnames(coda.object),
  prob.wide = 0.95,
  prob.narrow = 0.5,
  xlab = "HPD interval",
  names = NULL,
  type = "p",
  name.margin = 6.1,
  plt.left = NULL,
  plt.right = NULL,
  plt.bottom = NULL,
  plt.title = NULL,
  ylab = "",
  name.line = 3.9,
  main = "",
  main.line = 2,
  ...
)

Arguments

coda.object	coda object
wanted	variable names for coda object
prob.wide	outer width of posterior probability
prob.narrow	inner width of posterior probability
xlab	x-axis label
names	names
type	type of plot
name.margin	margin for name
plt.left	left of plot margin
plt.right	right of plot margin
plt.bottom	bottom of plot margin
plt.title	title of plot margin
ylab	y-axis label
name.line	line where names should be printed
main	text of main title
main.line	line where main title should be printed
...	additional arguments

Value

returns HPD plot

Examples

## not run

mauriziopaul/litterDiallel documentation built on June 3, 2022, 12:39 a.m.