recompose_metabolites: Merge metabolite stub and compartment to form an id
In maxconway/FluxBalanceAnalyzeR: An Extensible Approach to Flux Balance Analysis
Description
Usage
Arguments
Value
Examples
View source: R/metabolite_utilities.R
Description
Merge metabolite stub and compartment to form an id
Usage
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recompose_metabolites(
expanded_metabolites,
before_signifier = "_",
after_signifier = ""
)
Arguments
expanded_metabolites
a metabolite table as created by decompose_metabolites
before_signifier
a string that is inserted before the compartment identifier
after_signifier
a string that is inserted after the compartment identifier
Value
A merged metabolite table with one column, met
Examples
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data(ecoli_core)
mod <- reactiontbl_to_expanded(ecoli_core)
decompose_metabolites(mod$mets)
recompose_metabolites(decompose_metabolites(mod$mets))
maxconway/FluxBalanceAnalyzeR documentation built on Sept. 8, 2020, 6:20 p.m.
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Description Usage Arguments Value Examples
View source: R/metabolite_utilities.R
Description
Merge metabolite stub and compartment to form an id
Usage
1 2 3 4 5 | recompose_metabolites(
expanded_metabolites,
before_signifier = "_",
after_signifier = ""
)
|
Arguments
expanded_metabolites |
a metabolite table as created by |
before_signifier |
a string that is inserted before the compartment identifier |
after_signifier |
a string that is inserted after the compartment identifier |
Value
A merged metabolite table with one column, met
Examples
1 2 3 4 5 6 7 | data(ecoli_core)
mod <- reactiontbl_to_expanded(ecoli_core)
decompose_metabolites(mod$mets)
recompose_metabolites(decompose_metabolites(mod$mets))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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