Man pages for mbadge/hipsMultimodal
Analysis of MSH Hip Data
| adlCohort | Fetch Adelaide Test Samples split into differet subsampling... |
| adl_test | Adelaide test cohort scalars and inference results |
| BaseSummary | Compute hip-cohort-table-specific individual statistics |
| caseControlCohorts | matched cohort enrollment lists |
| check_dfs_fct_match | Verify that all factor levels in df2 are available in df1 |
| check_y | Confirm that a target vector is suitable for a classification... |
| Classifier | Classifier Abstract Base Class. |
| compare_cCs | Compare 2 ROC curves for AUC equivalence |
| ComplexSummary | Wrapper for fxns that generates combined table statistics by... |
| facet_cnn | Facet by CNN |
| Fp_ml_dir | Access ML dir contents |
| FS_hipsDir | Configured map of absolute project dir paths by system. |
| get_df_fct_lvls | Get a list of levels for each factor in a data.frame |
| ggMissing | View data.frame missing data proportion for each variable... |
| ggOddsRatios | View odds ratios of pair-wise target associations. |
| gg_pc | View a PC plot with indicated color/alpha |
| gg_x_target | ggplot wrapper to make an x scale with angled labels |
| glance.ClassifierCurve | View summary stats for a classifier point. |
| hips | Hips. |
| hipsCohort_ | Load a cohort table |
| hipsInfo_ | Convenience fxn to access pkg configuration info in inst/info |
| hipsOpt_ | Convenience fxn to fetch an option set by the hips package. |
| Kable | Kable S3 generic for kable printing with nice defaults |
| keep_binary | Only keep variables with two unique non-missing levels |
| OddsRatios | Compute pair-wise odds ratios between binary variables and a... |
| predict_pY | Predict probas for a classification models positive class |
| PrettyEach | Beautify individual table statistics |
| PrettyPredictors | Beautify predictor labels |
| PrettyTargets | Beautify target labels |
| readNpy | Read a numpy image file from disk |
| scalars | MSH cohort data |
| scale_color_cnn | Scales for CNNs |
| scale_color_cohort | ggplot scale color by cohort |
| scale_color_device | ggplot scale color by device |
| scale_color_fx | Make a ggplot scale to color by fracture |
| scale_color_target | Make a ggplot scale to color by target |
| scale_color_targetMode | Make a ggplot scale to color by target |
| scale_color_view | ggplot scale color by device |
| scale_fill_sex | ggplot scale fill by gender |
| scale_predictor_ | Scales for predictor sets. |
| scale_x_cohort | ggplot scale to map targets to the x-axis |
| scale_x_target | ggplot scale to map targets to the x-axis |
| StratifiedPartition | Augment cohort table with a stratified train/test partition |
| Tbl | Save table file(s) for hips project |
| train_eg_ids | Extract vector of training examples used for a model |
| train_glm | Train a glm model |
| train_lm | Base Linear Regression Model Function |
| train_n_eg | Extract total and limiting number of training examples from a... |
| train_terms | Extract predictor terms for a caret model |
| UniteCols | Join compound table statistic columns. |
