manhattan: manhattan create a Manhanttan plot

In mcanouil/ggFunctions: Custom ggplot2 Functions

manhattan create a Manhanttan plot

Description

manhattan create a Manhanttan plot

Usage

manhattan(data, chr, position, y, title = "Manhattan plot",
  xlab = "Chromosomes", ylab = "P-Value", sep = 0.02)

Arguments

data	[data.frame]: A 'data.frame' which include some columns: chromosome, position and pvalues.
chr	[character]: Name of the 'chr' (chromosome) column in 'data'.
position	[character]: Name of the 'position' column in 'data'.
y	[character]: Name of the 'p-value' column in 'data' (or anything you want to plot with a manhattan plot).
title	[character]: The text for the title.
xlab	[character]: The text for the x axis.
ylab	[character]: The text for the y axis.
sep	[numeric]: Width of the space between bars.

Value

A Manhattan plot in ggplot2 format.

mcanouil/ggFunctions documentation built on July 23, 2022, 8:28 p.m.