calc.llk.tree: Function to calculate integrated likelihood for set of...
In mcveanlab/TreeWASDir: Functions for TreeWAS on -/0/+ states
Description
Usage
Arguments
Value
View source: R/calc.llk.tree.R
Description
Function to calculate integrated likelihood for set of variants up tree
Usage
1
2
calc.llk.tree(pars, data.sub, returnForwardMatrix = FALSE,
returnGMatrix = FALSE)
Arguments
pars
A list object as returned by the function set.parameters
data.sub
A 3-dimension array (N. SNPs x N. phenotypes x 3) with state likelihoods.
returnForwardMatrix
Boolean
returnGMatrix
Boolean
Value
Either a numeric object with the Tree likelihood or a list with FWD and G matrices
mcveanlab/TreeWASDir documentation built on May 29, 2019, 2:01 a.m.
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Description Usage Arguments Value
View source: R/calc.llk.tree.R
Description
Function to calculate integrated likelihood for set of variants up tree
Usage
1 2 | calc.llk.tree(pars, data.sub, returnForwardMatrix = FALSE,
returnGMatrix = FALSE)
|
Arguments
pars |
A list object as returned by the function set.parameters |
data.sub |
A 3-dimension array (N. SNPs x N. phenotypes x 3) with state likelihoods. |
returnForwardMatrix |
Boolean |
returnGMatrix |
Boolean |
Value
Either a numeric object with the Tree likelihood or a list with FWD and G matrices
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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