FCGE_Data_PPARs: A real PPAR signaling pathways (PPAR-SP) dataset for...

In mdbahadur/rhcoclust: Robust Hierarchical Co-Clustering to Identify Significant Co-Cluster

A real PPAR signaling pathways (PPAR-SP) dataset for 'rhcoclust' package

Description

This is the real data matrix that used as an example in 'rhcoclust' package.

Details

The real data matrix collected from Nyström-Persson et al., 2013 (https://toxygates.nibiohn.go.jp/toxygates/#columns).The column of the data matrix represents doses of chemical compounds (DCCs) and row represents genes. Each element in the dataset represents fold change gene expression data.

Value

Matrix

Author(s)

Md. Bahadur Badsha <[e-mail]>

References

1. Nyström-Persson et al., (2013). Toxygates: interactive toxicity analysis on a hybrid microarray and linked data platform. Bioinformatics, Volume 29, Issue 23,Pages 3080–3086.

Examples

# Load library
library(rhcoclust)

# Load real data
data("FCGE_Data_PPARs")

mdbahadur/rhcoclust documentation built on Jan. 31, 2023, 10:13 p.m.