Files in mdraminski/CytoMeth
CytoMeth
.Rbuildignore
.gitignore
CHANGES.md
CytoMethRun.sh
DESCRIPTION
Dockerfile
LICENSE
R/CytoMeth.R
R/CytoMethQC.R
R/install.packages.R
R/main.R
R/main.utils.R
R/mainQC.R
R/utils.R
README.md
config.yml
dockerBuild.sh
install.data.sh
install.sh
tools/BS-Snper/BS-Snper.pl
tools/BS-Snper/BS-Snper.sh
tools/BS-Snper/Makefile
tools/BS-Snper/README.txt
tools/BS-Snper/chrome_funcs.c
tools/BS-Snper/chrome_funcs.h
tools/BS-Snper/clean.dir.sh
tools/BS-Snper/hash_funcs.c
tools/BS-Snper/hash_funcs.h
tools/BS-Snper/main.c
tools/BS-Snper/rrbsSnp
tools/BS-Snper/sam_funcs.c
tools/BS-Snper/sam_funcs.h
tools/BS-Snper/samtools-0.1.19.tar.bz2
tools/BisSNP/BisSNP-0.82.2.jar
tools/GATK/GenomeAnalysisTK.jar
tools/Picard/picard.jar
tools/Picard2/picard.jar
tools/Trimmomatic/LICENSE
tools/Trimmomatic/adapters/NexteraPE-PE.fa
tools/Trimmomatic/adapters/TruSeq2-PE.fa
tools/Trimmomatic/adapters/TruSeq2-SE.fa
tools/Trimmomatic/adapters/TruSeq3-PE-2.fa
tools/Trimmomatic/adapters/TruSeq3-PE.fa
tools/Trimmomatic/adapters/TruSeq3-SE.fa
tools/Trimmomatic/trimmomatic-0.36.jar
tools/methratio/methratio.py
tools/tools.conf.csv
tools/tools.conf.yml
