Files in meconsens/CellTyPETool
Facilitates Deconvolution of Bulk Tissue RNAseq Data for Disease Phenotype Analysis

.Rbuildignore

.gitignore

CellTyPETool.Rproj

DESCRIPTION

LICENSE

NAMESPACE

R/bretMarkerEffectOnPathology.R R/calcAndCompare.R R/data.R R/estimatesVPath.R R/findCellsMod.R R/genesUsed.R R/mgpQCMetrics.R R/runCellTyPETool.R README.Rmd README.md

data/bretCellMarkers.rda

data/countDf.rda

data/metadata.rda

data/mgpCellMarkers.rda

inst/extdata/CellTyPEToolOverview.PNG

inst/shiny-scripts/app.R man/bretCellMarkers.Rd man/bretMarkerEffectOnPathology.Rd man/calcAndCompare.Rd man/countDf.Rd man/estimatesVPath.Rd man/findCellsMod.Rd man/genesUsed.Rd man/markersPathology.Rd man/metadata.Rd man/mgpCellMarkers.Rd man/mgpQCMetrics.Rd man/runCellTyPETool.Rd tests/testthat.R tests/testthat/test-bretMarkerEffectOnPathology.R tests/testthat/test-calcAndCompare.R tests/testthat/test-estimatesVPath.R tests/testthat/test-findCellsMod.R tests/testthat/test-genesUsed.R tests/testthat/test-mgpQCMetrics.R

vignettes/.gitignore

vignettes/IntroductionCellTyPETool.Rmd

vignettes/bretMarkerEffectOnPathology.PNG

vignettes/corrPlot.PNG

vignettes/estimatesVPathBret.PNG

meconsens/CellTyPETool documentation built on Jan. 1, 2021, 9:25 a.m.

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