fetch_omop_ancestors: Fetch OMOP Ancestors

In meerapatelmd/chariotViz: Visualize the OMOP Vocabularies

Description

Fetch concept class ancestry in a Postgres instance of the OMOP vocabularies.

Usage

fetch_omop_ancestors(
  ...,
  conn,
  conn_fun = "pg13::local_connect(verbose=FALSE)",
  schema = "omop_vocabulary",
  verbose = FALSE,
  render_sql = FALSE,
  version_key
)

Arguments

conn	PARAM_DESCRIPTION
conn_fun	PARAM_DESCRIPTION, Default: 'pg13::local_connect(verbose=FALSE)'
schema	PARAM_DESCRIPTION, Default: 'omop_vocabulary'
verbose	PARAM_DESCRIPTION, Default: FALSE
render_sql	PARAM_DESCRIPTION, Default: FALSE
version_key	A list object that serves as the hash for caching. Set to NULL to cache under a generic hash.
type_from	PARAM_DESCRIPTION, Default: concept_class_id

Value

OUTPUT_DESCRIPTION

meerapatelmd/chariotViz documentation built on Dec. 21, 2021, 4:53 p.m.