Files in meireles/evolspec
Evolution of leaf spectra
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/aggregate_by_species.R
R/data.R
R/fit_spec_evol.R
R/phylo_signal.R
R/place_spec_on_tree.R
data-raw/chem16_ecosis_mod.csv
data-raw/oak/oak_dataset.R
data-raw/oak/oak_leaf_type.csv
data-raw/oak/oak_spectra_dataset.csv
data-raw/oak/oak_spectra_phylogeny.tre
data-raw/spec_autocov/spec_autocov_estimate_asd.csv
data-raw/spec_autocov/spec_autocov_estimates.R
data-raw/zanne_tree_subset.tre
data/oak_spec_jcb2016.rda
data/oak_tree.rda
data/spec_autocov_estimate.rda
evolspec.Rproj
man/aggregate_by_species.Rd
man/fit_spec_evol.Rd
man/i_add_tip_everywhere.Rd
man/i_place_spec_on_tree_ml.Rd
man/oak_spec_jcb2016.Rd
man/oak_tree.Rd
man/phylo_signal.Rd
man/place_spec_on_tree.Rd
man/spec_autocov_estimate.Rd
playground/nimbios_chem16.R
playground/oak_example.R
playground/spec_simulation/01_simulate_trees.R
playground/spec_simulation/02_evolve_prospect_param.R
playground/spec_simulation/03_simulate_spec_prospect.R
playground/spec_simulation/README.md
playground/spec_simulation/figures/evolved_spectra_prospect.pdf
playground/spec_simulation/figures/traitigram_prosp_Cab.pdf
playground/spec_simulation/figures/traitigram_prosp_Cm.pdf
playground/spec_simulation/figures/tree_mono_and_poly.pdf
playground/spec_simulation/output/data_bm_base.rds
playground/spec_simulation/output/data_ou_mono.rds
playground/spec_simulation/output/data_ou_poly.rds
playground/spec_simulation/output/prospect_spec_bm_base.rds
playground/spec_simulation/output/prospect_spec_ou_mono.rds
playground/spec_simulation/output/prospect_spec_ou_poly.rds
playground/spec_simulation/output/regime_cols.rds
playground/spec_simulation/output/tree_base.rds
playground/spec_simulation/output/tree_mono.rds
playground/spec_simulation/output/tree_poly.rds
vignettes/intro_to_evolspec.R
vignettes/intro_to_evolspec.Rmd
vignettes/intro_to_evolspec.pdf
