Description Usage Arguments Author(s) Examples
Genomic vizualization for epigenomics tracks
1 |
chrname |
character string specifing the chromosome of interest |
... |
Any additional arguments |
Mohammed Abdallah
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 | ##---- Should be DIRECTLY executable !! ----
##-- ==> Define data, use random,
##-- or do help(data=index) for the standard data sets.
## The function is currently defined as
function (chrname = "chr22", ...)
{
require(ERBS)
data(HepG2)
data(GM12878)
require(ggbio)
require(GenomicRanges)
ap1 = autoplot(GenomicRanges::subset(HepG2, seqnames == chrname))
ap2 = autoplot(GenomicRanges::subset(GM12878, seqnames ==
chrname))
tracks(HepG2 = ap1, Bcell = ap2, ...)
}
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