MetaQC-package: MetaQC R package for quality control on multiple genomics...

In metaOmic/MetaQC: Objective quality control and inclusion/ exclusion criteria for genomic meta-analysis

Description

MetaQC R package for quality control on multiple genomics data

Details

Package:	MetaQC
Type:	Package
Version:	1.0
Date:	2016-12-20
License:	License

Author(s)

Silvia Liu <[e-mail]>

References

Kang, Dongwan D., et al. MetaQC: objective quality control and inclusion/exclusion criteria for genomic meta-analysis. Nucleic acids research 40.2 (2012): e15-e15.

Examples

data(prostate8)
data(pathway)
DList=prostate8$data
colLabel=prostate8$dataLabel
GList=pathway[[1]]
filterGenes=TRUE
cutRatioByMean=0.3
cutRatioByVar=0.3

#QCresult=MetaQC(DList, colLabel, GList,filterGenes,cutRatioByMean,cutRatioByVar)
#plotMetaQC(QCresult$scoreTable)

metaOmic/MetaQC documentation built on May 22, 2019, 6:54 p.m.