map_id_to_camera: Map identification results onto camera object

In metaboraid/metaboraid: Multi-search engine metabolomics identification

Map identification results onto camera object

Description

This function accepts a CAMERA object, identification results (a data.frame) and map MSMS data onto the features

Usage

map_id_to_camera(
  metFragSearchResult = NA,
  cameraObject = NA,
  ppm = 5,
  MinusTime = 5,
  PlusTime = 5,
  method = "regular",
  ncore
)

Arguments

metFragSearchResult	A data.frame that much contain the identification results and has to have three addional columns: parentMZ, parentRT and fileName
cameraObject	A CAMERA object including addcuts and isotopes
ppm	ppm mass devation
MinusTime	The lower boundary of the retention time window
PlusTime	The higher boundary of the retention time window
method	The method for mapping, This can be one of regular, fast, or parallel
ncore	Number of cores if parallel is selected for mapping method

Value

A list of Identification where name of each element correspond to an index of a row in cameraObject

metaboraid/metaboraid documentation built on Jan. 29, 2023, 1:41 a.m.