recomb_extract_locuszoom: Query LocusZoom API for Recombination Data

In mglev1n/locusplotr: Create Regional Association Plots

Query LocusZoom API for Recombination Data

Description

This function queries the LocusZoom API to retrieve recombination data for a specified genomic region and returns the result as a tibble.

Usage

recomb_extract_locuszoom(chrom, start, end, genome_build = "GRCh37")

Arguments

chrom	A numeric value specifying the chromosome (e.g., 1, 2, ..., 22, 23 for X, 24 for Y)
start	An integer specifying the start position of the region of interest
end	An integer specifying the end position of the region of interest
genome_build	A character string specifying the genome build (default: "GRCh37")

Value

A tibble containing the parsed recombination data from the LocusZoom API

Examples

## Not run: 
result <- recomb_locuszoom(chrom = 1, start = 1000, end = 150000)
print(result)

# Using a different genome build
result_grch38 <- recomb_locuszoom(chrom = 1, start = 1000, end = 150000, genome_build = "GRCh38")

## End(Not run)

mglev1n/locusplotr documentation built on July 31, 2024, 8:41 p.m.