API for mgperry/heatmaps
Flexible Heatmaps for Functional Genomics and Sequence Features

Global functions
CoverageHeatmap Man page
CoverageHeatmap,GenomicRanges,GenomicRanges-method Man page
CoverageHeatmap,GenomicRanges,RleList-method Man page
Heatmap Man page Source code
Heatmap-class Man page
HeatmapExamples Man page
PWMScanHeatmap Man page
PWMScanHeatmap,DNAStringSet,matrix-method Man page
PatternHeatmap Man page
PatternHeatmap,DNAStringSet,character-method Man page
PatternHeatmap,DNAStringSet,matrix-method Man page
bin_heatmap Source code
color_error Source code
coords Man page Man page
coords,Heatmap-method Man page
coords<- Man page
coords<-,Heatmap-method Man page
default_color Man page Source code
detect_algorithm Source code
expand_options Source code
gaussianFilter Source code
getScale Man page Source code
get_device_params Source code
get_options Source code
gg_col Source code
heatmapOptions Man page Source code
hm Man page
hm2 Man page
image Man page
image,Heatmap-method Man page
image<- Man page
image<-,Heatmap-method Man page
kernelSmooth Source code
label Man page Man page
label,Heatmap-method Man page
label<- Man page
label<-,Heatmap-method Man page
legend_left Source code
legend_right Source code
length,Heatmap-method Man page
makeGaussian2D Source code
make_x_ticks Source code
mat Man page
metadata Man page Man page
metadata,Heatmap-method Man page
metadata<- Man page
metadata<-,Heatmap-method Man page
normalise_scales Source code
nseq Man page Man page
nseq,Heatmap-method Man page
nseq<- Man page
nseq<-,Heatmap-method Man page
plotHeatmap Man page
plotHeatmap,Heatmap-method Man page
plotHeatmapList Man page Source code
plotHeatmapMeta Man page Source code
plotPatternDensityMap Man page
plotPatternDensityMap,DNAStringSet-method Man page
plot_clusters Man page Source code
plot_legend Man page Source code
pwm_score_percentile Source code
rev,Heatmap-method Man page
rle_list Man page
scale Man page Man page
scale,Heatmap-method Man page
scale<- Man page
scale<-,Heatmap-method Man page
smoothHeatmap Man page
smoothHeatmap,Heatmap-method Man page
string_set Man page
subset_if_list Source code
tata_pwm Man page
width,Heatmap-method Man page
windows Man page
xm Man page
xm,Heatmap-method Man page
ym Man page
ym,Heatmap-method Man page
mgperry/heatmaps documentation built on July 5, 2017, 4:31 p.m.