README.md

In mgzjys/DemeNumberSelector: What the Package Does (One Line, Title Case)

DemeNumberSelector

DemeNumberSelector

Instructions for use:

library(devtools)
install_github("mgzjys/DemeNumberSelector")
library(DemeNumberSelector)

setwd("/path~to~your~folder")

Gene_diff<-"genomic.diffs"
Sample_location<-"samples.coord"
Outline<-"outline.outer"

#calculate the distance, you may need to replace this with the topological skeleton distance
length<-Edgelength(Gene_diff, Sample_location, Automode)


#let's say you have length value=3600
length<-3600

#calculate the deme number
deme<-DemeNumber(Outline,length)

mgzjys/DemeNumberSelector documentation built on April 2, 2021, 7:49 a.m.