CommT.anova: Conduct ANOVA analysis on tree distance matrix

Description Usage Arguments Author(s) Examples

Description

Function to conduct an ANOVA analysis on the matrix of tree distances generated via function CommT.kfdist().

Usage

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CommT.anova(in_df)

Arguments

in_df

a dataframe storing the tree distances inferred via function CommT.kfdist(). This dataframe constitutes a stacked list of distances grouped by genetic locus and is the default output of function CommT.kfdist()

Author(s)

Michael Gruenstaeudl

Maintainer: Michael Gruenstaeudl [email protected]

Examples

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  # Load libraries
  #  require(ape)

  # Load input data
    data(post_gt_distrs_BEAST)
    data(post_gt_distrs_starBEAST)

  # Calculate KF distances
    in_data = CommT.kfdist(post_gt_distrs_BEAST, post_gt_distrs_starBEAST)

  # Generate ANOVA legend
    legend_text = CommT.anova(in_data)

michaelgruenstaeudl/CommT_Code documentation built on May 22, 2017, 6:35 a.m.