| Bary_Projector | Compute Projector matrix from DESIGN_rows |
| Bary_Projector_Cond | Compute condenses Projector matrix from DESIGN_rows |
| Bary_Projector_Cond_Sqrt | Compute condensed Projector matrix from DESIGN_rows |
| ComputeSplus | Compute a compromise, as defined in DiSTATIS |
| Condense_Rows | Condence the rows of a matrix according to DESIGN$rows |
| CP2MFAnormedCP | MFA normalize an array of cross-product matrices |
| DblCenterD2 | Double Center a squared distance matrix |
| Dev2 | Compute the squared distances between rows of two matrices |
| DiDiSTATIS | Conduct Discriminant DiSTATIS |
| DiDiSTATIS_boot_tables | Bootstrap resample rows within hypothesized groups for... |
| DiDiSTATIS_LOO_rows | Leave One Out cross-validation for the rows for DiDiSTATIS |
| DiDiSTATIS_perm_omni_sort | Permutation test for the omnibus null hypothesis for... |
| DiDiSTATIS_SH_rows | Leave One Out cross-validation for the rows for DiDiSTATIS |
| DiDiSTATIS_Summary_Stats_Table | Print a table of summary stats |
| DiMDS | Conduct barycentric discriminant metric multidimensional... |
| DiMDS_LOO_rows | Leave One Out cross-validation for the rows for DiMDS |
| DiMDS_perm_rows | Permutation test for the null hypothesis on the rows of DiMDS |
| DiMDS_SH_rows | Split Half cross-validation for the rows for DiMDS |
| Dist2CP | Apply DblCenterDist to an array of squared distance matrices |
| DiSTATIS | Conduct DiSTATIS |
| EigenCP | Eigen-decompose a CP matrix. |
| EigenCP_Full | Eigen-decompose a CP matrix. |
| EigenDiCP | Discriminant Eigen-decomposition for a CP matrix. |
| EigenDiDiSTATIS | Eigen-decompose the Barycentric Grand Compromise, and project... |
| EigenDiSTATIS | Eigen-decompose the Compromise, and then compute everything... |
| EigenHiDiSTATIS | Eigen-decompose the Grand Compromise, and then compute... |
| EigenHMFA | Eigen-decompose the Grand Consensus, and then compute... |
| EigenMFA | Eigen-decompose the Consensus, and then compute everything... |
| FlipCheck | If Component 1 factor Scores are all on the left side, flip... |
| GetAlpha | Obtain a vector of alpha-weights from an inner product matrix... |
| GetBaryGrandComp | Integrate tables hierarchically, with respect to row design,... |
| GetBaryGrandComp_BootTables | Integrate tables hierarchically, to give barycentric group... |
| GetCmat | Compute an inner-product matrix (RV or C) from an array of CP... |
| GetCompromise | Collapse tables for DiSTATIS |
| GetConsensus | Collapse tables for MFA |
| GetCP | Transform from input data to a CP matrix |
| GetCP_array | Transform from input data to a CP_array |
| GetGrandCompromise | Integrate tables hierarchically, to give group and grand... |
| GetGrandCompromise_BootTables | Integrate tables hierarchically, to give group and grand... |
| GetGrandConsensus | Collapse tables for HMFA |
| Happy_p | Remove the leading zero before the p-value |
| HiDiSTATIS | Conduct Hierarchical DiSTATIS |
| HiDiSTATIS_boot_tables | Bootstrap resample rows within hypothesized groups for... |
| HiDiSTATIS_LOO_tables | Leave One Out cross-validation for the tables of HiDiSTATIS |
| HiDiSTATIS_perm_tables | Permutation test for the null hypothesis on the tables of... |
| HiDiSTATIS_SH_tables | Split Half cross-validation for the tables of HiDiSTATIS |
| HMFA | Conduct Hierarchical MFA |
| Initialize_DESIGNs | Create Row and Table DESIGN objects |
| makeFlip_mat | Flip_mat is a matrix to manually flip components to match... |
| MDS | Conduct metric multidimensional scaling |
| MFA | Conduct MFA (specifically for squared distance matrices) |
| MFAnormCP | MFA normalize a psd matrix |
| MFAnormCPFinder | Identify coefficients to MFA normalize an array |
| MFAnormCPFinder_1 | Identify the coefficient to MFA normalize a matrix |
| MusicFreeSort | Free Sort of 36 Musical Pieces |
| Ortho_Projector | Compute the Orthogonal Projector matrix from the Barycentric... |
| Pick_rows_to_leave_out | Identify a matrix of row indices for LOO_rows |
| Pick_rows_to_split | Identify a matrix of row indices for SH_rows |
| Pick_tables_to_leave_out | Identify a matrix of indices for LOO_tables |
| Pick_tables_to_split | Identify a matrix of indices for SH_talbes The rows of the... |
| rbind_array_2_matrix | For permutation of tables of DiDiSTATIS, Plot each stimulus... |
| SortDist2Sort | Transform a Sorting Distance matrix to a column of the... |
| SortFromSortDist | Transform from an array of Sorting Distance to a Sorting... |
| SS_from_F | Compute SS from factor scores |
