Man pages for microbiome/miaViz
Microbiome Analysis Plotting and Visualization
| deprecate | These functions will be deprecated. Please use other... |
| getNeatOrder | Sorting by radial theta angle |
| mia-datasets | miaViz example data |
| mia-plot-args | Additional arguments for plotting |
| miaViz-package | miaViz - Microbiome Analysis Plotting and Visualization |
| plotAbundance | Plotting abundance data |
| plotAbundanceDensity | Plot abundance density |
| plotCCA | Plot RDA or CCA object |
| plotColTile | Plot factor data as tiles |
| plotDMN | Plotting Dirichlet-Multinomial Mixture Model data |
| plotGraph | Plotting igraph objects with information from a... |
| plotHistogram | Create histogram or barplot of 'assay', 'rowData' or... |
| plotLoadings | Plot feature loadings for TreeSummarizedExperiment objects or... |
| plotMediation | Visualize mediation |
| plotNMDS | Wrapper for scater::plotReducedDim() |
| plotPrevalence | Plot prevalence information |
| plotScree | Create a scree plot |
| plotSeries | Plot Series |
| plotTree | Plotting tree information enriched with information |
| treeData | Adding information to tree data in 'TreeSummarizedExperiment' |
