R/Test.R
In miepstei/MetabDILT1D: Provides the analysis tools for the DILT1D dataset
#to turn into a txt file with locations on ipswich
metaboliteData <- "/Users/me394/Dropbox/Academic/EBPOD/Metabolomics/MetabolonDILT1D/Data/Raw/MetaboliteData.csv"
metaboliteFile <- "/Users/me394/Dropbox/Academic/EBPOD/Metabolomics/MetabolonDILT1D/Data/Raw/MetaboliteInfo.csv"
sampleFile <- "/Users/me394/Dropbox/Academic/EBPOD/Metabolomics/MetabolonDILT1D/Data/Raw/SampleInfo.csv"
#covariate file + stem
covariateDate = "2014-04-07"
covariateStem <- "/ipswich/data/shared/DILT1D/lookups/phenotype-"
covariateSourceFile <- "/ipswich/data/shared/DILT1D/RFunctions/readdoses.R"
#clinical file locations
smbgFile <- "/ipswich/data/shared/DILT1D/datasets/clinical-observations/clinical-data-smbg-FULL-2015-05-19.tab"
hbaFile <- "/ipswich/data/shared/DILT1D/datasets/clinical-HbA1c/HbA1c-results-by-visit-2014-06-11.tab"
cpeptideFile <- "/ipswich/data/shared/DILT1D/datasets/clinical-C-peptide/C-peptide-results-by-visit-2014-06-06.tab"
miepstei/MetabDILT1D documentation built on May 22, 2019, 10:50 p.m.
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#to turn into a txt file with locations on ipswich
metaboliteData <- "/Users/me394/Dropbox/Academic/EBPOD/Metabolomics/MetabolonDILT1D/Data/Raw/MetaboliteData.csv"
metaboliteFile <- "/Users/me394/Dropbox/Academic/EBPOD/Metabolomics/MetabolonDILT1D/Data/Raw/MetaboliteInfo.csv"
sampleFile <- "/Users/me394/Dropbox/Academic/EBPOD/Metabolomics/MetabolonDILT1D/Data/Raw/SampleInfo.csv"
#covariate file + stem
covariateDate = "2014-04-07"
covariateStem <- "/ipswich/data/shared/DILT1D/lookups/phenotype-"
covariateSourceFile <- "/ipswich/data/shared/DILT1D/RFunctions/readdoses.R"
#clinical file locations
smbgFile <- "/ipswich/data/shared/DILT1D/datasets/clinical-observations/clinical-data-smbg-FULL-2015-05-19.tab"
hbaFile <- "/ipswich/data/shared/DILT1D/datasets/clinical-HbA1c/HbA1c-results-by-visit-2014-06-11.tab"
cpeptideFile <- "/ipswich/data/shared/DILT1D/datasets/clinical-C-peptide/C-peptide-results-by-visit-2014-06-06.tab"
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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