alpineData-package: GAlignmentPairs for four samples from the GEUVADIS project

In mikelove/alpineData: Data for the alpine package vignette

Description

FASTQ files for four RNA-seq samples from the GEUVADIS project were downloaded, aligned and constructed as GAlignmentPairs, according to the steps presented in inst/scripts/make-data.R

Usage

ERR188297(metadata=FALSE)
ERR188088(metadata=FALSE)
ERR188204(metadata=FALSE)
ERR188317(metadata=FALSE)

Arguments

metadata

logical value indicating whether metadata only should be returned or if the resource should be loaded. Default behavior(metadata=FALSE) loads the data.

Format

GAlignmentPairs

Value

These accessor functions return GAlignmentPairs objects

Source

FASTQ files for four RNA-seq samples from the GEUVADIS project.

References

Lappalainen, T., et al. Transcriptome and genome sequencing uncovers functional variation in humans. Nature. 501(7468): 506-511 (2013) doi: 10.1038/nature12531

Examples

  ERR188297()

mikelove/alpineData documentation built on May 22, 2019, 10:52 p.m.