#############################################################################
#
# XLConnect
# Copyright (C) 2010-2024 Mirai Solutions GmbH
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program. If not, see <https://www.gnu.org/licenses/>.
#
#############################################################################
#############################################################################
#
# Creates a Java sequence length encoding object for efficient encoding
# of sequences
#
# Author: Martin Studer, Mirai Solutions GmbH
#
#############################################################################
.jsle <- function(x) {
sle <- seqle(as.integer(x))
new(
J("com.miraisolutions.xlconnect.utils.SequenceLengthEncoding"),
.jarray(sle$values),
.jarray(sle$lengths),
as.integer(sle$increment)
)
}
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