background_dist: Background data for Ramachandran diagram

Description Usage Format Source References

Description

A list with four elements "general", "glycine", "pre.pro" and "proline". Each element is a matrix containing the background data used by ggplot2{geom_raster} or ggplot2{geom_contour_filled} to show favorable regions of torsion angles.

Usage

1

Format

An object of class list of length 4.

Source

https://github.com/S-John-S/Ramachandran-Plot https://warwick.ac.uk/fac/sci/moac/people/students/peter_cock/r/ramachandran/

References

Lovell, S.C., Davis, I.W., Arendall, W.B., III, de Bakker, P.I.W., Word, J.M., Prisant, M.G., Richardson, J.S. and Richardson, D.C. (2003), Structure validation by Cα geometry: φ,ψ and Cβ deviation. Proteins, 50: 437-450. https://doi.org/10.1002/prot.10286


missuse/ggrama documentation built on Dec. 21, 2021, 7:01 p.m.