getEsetMeta: Get ExpressionSet metadata
In mjakubczak/spicyScript: Run spicy models from command line
Description
Usage
Arguments
Value
Description
Returns basic ExpressionSet metadata in json format. It is used for galaxy
server purposes.
Usage
1
2
getEsetMeta(filename, discrCol = NULL, minGroups = 2L,
maxGroups = 10L)
Arguments
filename
character, the filename of the ExpressionSet RDS file
discrCol
character, the name of the discrimination column (column
that contains observation groups)
minGroups
integer, the minimal valid number of groups
maxGroups
integer, the maximal valid number of groups
Value
list in json format (dict) with fields: dims, phenoCols, discrCol,
isTrainingDataSet, groups
mjakubczak/spicyScript documentation built on May 24, 2019, 8:54 a.m.
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Description Usage Arguments Value
Description
Returns basic ExpressionSet metadata in json format. It is used for galaxy server purposes.
Usage
1 2 | getEsetMeta(filename, discrCol = NULL, minGroups = 2L,
maxGroups = 10L)
|
Arguments
filename |
character, the filename of the ExpressionSet RDS file |
discrCol |
character, the name of the discrimination column (column that contains observation groups) |
minGroups |
integer, the minimal valid number of groups |
maxGroups |
integer, the maximal valid number of groups |
Value
list in json format (dict) with fields: dims, phenoCols, discrCol, isTrainingDataSet, groups
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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