deFinetti.plot: Plot a de Finetti diagram

In mkanai/deFinetti: A package for plotting a de Finetti diagram and distributions of F-statistics of genotypes.

Description

Plot a de Finetti diagram

Usage

deFinetti.plot(x, file = "", main = "", vertexlab = colnames(x),
  cex = 1, cex.main = 2, cex.lab = 2, pch = 19, markerlab = NULL,
  markerpos = 1, markercex = 1, markercol = "black", markerbg = "black",
  hwcurve = TRUE, with_F_color = FALSE, without_markers = FALSE,
  pdf_out = FALSE, ...)

Arguments

x	a numeric matrix
file	a string of output filename
main	a string of axis label
vertexlab	a string vector of vertex labels
cex	a numeric of character expansion factor
cex.main	a numeric of magnification for titles relative to cex
cex.lab	a numeric of magnification for labels relative to cex
pch	a symbol for plotting markers
markerlab	a string vector of marker labels
markerpos	a position specifier for marker labels
markercex	a numeric of magnification for markers relative to cex
markercol	a color for plotting marker symbols
markerbg	a background (fill) color for plotting marker symbols given by pch = 21:25
hwcurve	a logical indicating whether to draw a curve of Hardy-Weinberg Equilibrium
with_F_color	a logical indicating whether to draw colors based on F-statistics
without_markers	a logical indicating whether to plot markers
pdf_out	a logical indicating whether to output a diagram
...	arguments to be passed to plot

mkanai/deFinetti documentation built on May 23, 2019, 1:05 a.m.