mkborregaard/nodiv: Compares the Distribution of Sister Clades Through a Phylogeny

An implementation of the nodiv algorithm, see Borregaard, M.K., Rahbek, C., Fjeldsaa, J., Parra, J.L., Whittaker, R.J. & Graham, C.H. 2014. Node-based analysis of species distributions. Methods in Ecology and Evolution 5(11): 1225-1235. <DOI:10.1111/2041-210X.12283>. Package for phylogenetic analysis of species distributions. The main function goes through each node in the phylogeny, compares the distributions of the two descendant nodes, and compares the result to a null model. This highlights nodes where major distributional divergence have occurred. The distributional divergence for these nodes is mapped.

Getting started

Package details

AuthorMichael Krabbe Borregaard
MaintainerMichael Krabbe Borregaard <mkborregaard@sund.ku.dk>
LicenseMIT + file LICENSE
Version1.4.1
URL https://github.com/mkborregaard/nodiv
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("mkborregaard/nodiv")
mkborregaard/nodiv documentation built on April 7, 2023, 9:52 a.m.