convertEpivizGenes: Convert Epiviz GenesTrack to Gviz GeneRegionTrack.

In mlwalter4/epivizGviz: Convert epivizr workspaces to GViz plots, and viceversa

Description

Convert Epiviz GenesTrack to Gviz GeneRegionTrack.

Usage

convertEpivizGenes(app, chart_obj, chr = NULL)

Arguments

app	(EpivizApp) an object of class EpivizApp.
chart_obj	(EpivizChart) an object of class EpivizChart.
chr	(character) the name of the chromosome to plot over, ex: "chr11".

Value

A list containing an object of class IdeogramTrack, GenomeAxisTrack, GeneRegionTrack

Examples

# see package vignette for example usage
## Not run: 
convertEpivizGenes(app, chart_obj, chr=NULL)

## End(Not run)

mlwalter4/epivizGviz documentation built on Feb. 28, 2020, 12:24 a.m.