fish215: Genotypes of lake trout from Ontario, Canada
In mlysy/MADPop: MHC Allele-Based Differencing Between Populations
fish215 R Documentation
Genotypes of lake trout from Ontario, Canada
Description
Observable genotypes (up to possibly duplicated alleles) of 215 lake trout (Salvelinus namaycush) collected from 11 lakes in Ontario, Canada.
Format
A data.frame with 215 rows and 5 columns. The first column is an (optional) vector of population identifiers. The next four columns contain the recorded genotype for each observation (row). Each row contains up to four distinct allele identifiers in any order. Missing alleles should be denoted by NA, or "", but not both.
Details
This data.frame is how a typical spreadsheet of genotype data gets imported into R. Data must adhere to this format to be correctly processed by the functions in MADPop.
Source
Kuntz, S. (2014). Population Differentiation of Ontario Lake trout (Salvelinus namaycush) using the Major Histocompatibility Complex class II \beta gene (URL).
Examples
head(fish215)
mlysy/MADPop documentation built on Feb. 28, 2024, 12:29 p.m.
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| fish215 | R Documentation |
Genotypes of lake trout from Ontario, Canada
Description
Observable genotypes (up to possibly duplicated alleles) of 215 lake trout (Salvelinus namaycush) collected from 11 lakes in Ontario, Canada.
Format
A data.frame with 215 rows and 5 columns. The first column is an (optional) vector of population identifiers. The next four columns contain the recorded genotype for each observation (row). Each row contains up to four distinct allele identifiers in any order. Missing alleles should be denoted by NA, or "", but not both.
Details
This data.frame is how a typical spreadsheet of genotype data gets imported into R. Data must adhere to this format to be correctly processed by the functions in MADPop.
Source
Kuntz, S. (2014). Population Differentiation of Ontario Lake trout (Salvelinus namaycush) using the Major Histocompatibility Complex class II \beta gene (URL).
Examples
head(fish215)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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