mmollina/viewpoly: A Shiny App to Visualize Genetic Maps and QTL Analysis in Polyploid Species
Provides a graphical user interface to integrate, visualize and explore results from linkage and quantitative trait loci analysis, together with genomic information for autopolyploid species. The app is meant for interactive use and allows users to optionally upload different sources of information, including gene annotation and alignment files, enabling the exploitation and search for candidate genes in a genome browser. In its current version, 'VIEWpoly' supports inputs from 'MAPpoly', 'polymapR', 'diaQTL', 'QTLpoly', 'polyqtlR', 'GWASpoly', and 'HIDECAN' packages.
Getting started
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Package details |
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| Maintainer | Cristiane Taniguti <chtaniguti@tamu.edu> |
| License | GPL (>= 3) |
| Version | 0.4.2 |
| URL | https://github.com/mmollina/viewpoly |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
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