dist_prob_to_class: Returns the class with the highest probability in a genotype...
In mmollina/viewpoly: A Shiny App to Visualize Genetic Maps and QTL Analysis in Polyploid Species
View source: R/utils_helpers.R
dist_prob_to_class R Documentation
Returns the class with the highest probability in
a genotype probability distribution. Function from MAPpoly.
Description
Returns the class with the highest probability in
a genotype probability distribution. Function from MAPpoly.
Usage
dist_prob_to_class(geno, prob.thres = 0.9)
Arguments
geno
the probabilistic genotypes contained in the object
'mappoly.data'
prob.thres
probability threshold to select the genotype.
Values below this genotype are assumed as missing data
Value
a matrix containing the doses of each genotype and
marker. Markers are disposed in rows and individuals are
disposed in columns. Missing data are represented by NAs
mmollina/viewpoly documentation built on April 5, 2025, 9:08 p.m.
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View source: R/utils_helpers.R
| dist_prob_to_class | R Documentation |
Returns the class with the highest probability in a genotype probability distribution. Function from MAPpoly.
Description
Returns the class with the highest probability in a genotype probability distribution. Function from MAPpoly.
Usage
dist_prob_to_class(geno, prob.thres = 0.9)
Arguments
geno |
the probabilistic genotypes contained in the object
|
prob.thres |
probability threshold to select the genotype. Values below this genotype are assumed as missing data |
Value
a matrix containing the doses of each genotype and marker. Markers are disposed in rows and individuals are disposed in columns. Missing data are represented by NAs
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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