This repository is a template for the codes I use in histopathology research.
I have tried to collect common codes in My R Codes For Data Analysis, but I find the template repositories more helpful. LAter I plan to collect them under a package histopathR.
How to use
Fork this repository. Then use this repository as template as described here.
Use RStudio project as described here.
Do not forget to change chunk functions to eval = TRUE
.
This template contains packages using renv.
UNDER CONSTRUCTION 🛠⛔️⚠️🔩
🔬 I plan to collect codes for future research. I will add some small functions. - Methods to import and prepare data for analysis. - Descriptive statistics. - Hypothesis tests. - Survival analysis. - Regression analysis. - Cluster analysis.
🔬 I plan to make template files to form when loading the package.
🔬 I plan two tutorial files as vignettes: - How to prepare data for histopathological research - How to analyse data for histopathological research
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