topn_plot: Top 'N' Plot
In montilab/CaDrA: Candidate Driver Analysis
topn_plot R Documentation
Top 'N' Plot
Description
Generate a heatmap representation of overlapping meta-features across
top N feature searches using candidate_search function
Usage
topn_plot(topn_list)
Arguments
topn_list
a list of objects obtained from candidate_search
using the following parameters: FS = sim_FS,
input_score = sim_Scores, top_N = 7,
method = "ks_pval", alternative = "less",
search_method = "both", max_size = 10,
and best_score_only = FALSE.
Value
a heatmap of overlapping meta-features across top N
feature searches
Examples
# Load pre-computed Top-N list generated for sim_FS dataset
data(topn_list)
# Get the overlapping top N plot
topn_plot(topn_list = topn_list)
montilab/CaDrA documentation built on March 15, 2024, 9:59 p.m.
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| topn_plot | R Documentation |
Top 'N' Plot
Description
Generate a heatmap representation of overlapping meta-features across
top N feature searches using candidate_search function
Usage
topn_plot(topn_list)
Arguments
topn_list |
a list of objects obtained from |
Value
a heatmap of overlapping meta-features across top N feature searches
Examples
# Load pre-computed Top-N list generated for sim_FS dataset
data(topn_list)
# Get the overlapping top N plot
topn_plot(topn_list = topn_list)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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