.Rbuildignore
.gitattributes
.gitignore
DESCRIPTION
Dockerfile
LICENSE
NAMESPACE
R/constraints.R
R/data.R
R/filtering.R
R/learning.R
R/models.R
R/utils.R
README.Rmd
README.md
README_files/figure-gfm/unnamed-chunk-8-1.png
data-raw/toy.R
data/toy.rda
docs/404.html
docs/LICENSE-text.html
docs/README_files/figure-gfm/unnamed-chunk-8-1.png
docs/articles/docs/constraints.html
docs/articles/docs/constraints_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/docs/constraints_files/figure-html/unnamed-chunk-10-1.png
docs/articles/docs/constraints_files/figure-html/unnamed-chunk-11-1.png
docs/articles/docs/constraints_files/figure-html/unnamed-chunk-12-1.png
docs/articles/docs/constraints_files/figure-html/unnamed-chunk-15-1.png
docs/articles/docs/constraints_files/figure-html/unnamed-chunk-3-1.png
docs/articles/docs/constraints_files/figure-html/unnamed-chunk-5-1.png
docs/articles/docs/constraints_files/figure-html/unnamed-chunk-5-2.png
docs/articles/docs/constraints_files/figure-html/unnamed-chunk-6-1.png
docs/articles/docs/constraints_files/figure-html/unnamed-chunk-7-1.png
docs/articles/docs/constraints_files/figure-html/unnamed-chunk-8-1.png
docs/articles/docs/constraints_files/figure-html/unnamed-chunk-9-1.png
docs/articles/docs/estimation_files/figure-html/unnamed-chunk-2-1.png
docs/articles/docs/estimation_files/figure-html/unnamed-chunk-4-1.png
docs/articles/docs/filtering.html
docs/articles/docs/filtering_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/docs/filtering_files/core-js-2.5.3/LICENSE
docs/articles/docs/filtering_files/core-js-2.5.3/package.json
docs/articles/docs/filtering_files/core-js-2.5.3/shim.min.js
docs/articles/docs/filtering_files/htmlwidgets-1.5.1/htmlwidgets.js
docs/articles/docs/filtering_files/htmlwidgets-1.5.3/htmlwidgets.js
docs/articles/docs/filtering_files/react-16.8.6/AUTHORS
docs/articles/docs/filtering_files/react-16.8.6/LICENSE.txt
docs/articles/docs/filtering_files/react-16.8.6/react-dom.min.js
docs/articles/docs/filtering_files/react-16.8.6/react.min.js
docs/articles/docs/filtering_files/react-17.0.0/AUTHORS
docs/articles/docs/filtering_files/react-17.0.0/LICENSE.txt
docs/articles/docs/filtering_files/react-17.0.0/react-dom.min.js
docs/articles/docs/filtering_files/react-17.0.0/react.min.js
docs/articles/docs/filtering_files/reactable-binding-0.1.0/reactable.js
docs/articles/docs/filtering_files/reactable-binding-0.2.3/reactable.js
docs/articles/docs/filtering_files/reactwidget-1.0.0/react-tools.js
docs/articles/docs/filtering_files/reactwidget-1.0.0/react-tools.js.map
docs/articles/docs/hierarchy.html
docs/articles/docs/hierarchy_files/DiagrammeR-styles-0.2/styles.css
docs/articles/docs/hierarchy_files/grViz-binding-1.0.1/grViz.js
docs/articles/docs/hierarchy_files/htmlwidgets-1.5.1/htmlwidgets.js
docs/articles/docs/hierarchy_files/viz-0.3/viz.js
docs/articles/docs/learning.html
docs/articles/docs/learning_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/docs/netviz.html
docs/articles/docs/simulations.html
docs/articles/docs/simulations_files/accessible-code-block-0.0.1/empty-anchor.js
docs/articles/docs/simulations_files/figure-html/unnamed-chunk-10-1.png
docs/articles/docs/simulations_files/figure-html/unnamed-chunk-3-1.png
docs/articles/docs/simulations_files/figure-html/unnamed-chunk-4-1.png
docs/articles/docs/simulations_files/figure-html/unnamed-chunk-5-1.png
docs/articles/docs/simulations_files/figure-html/unnamed-chunk-5-2.png
docs/articles/docs/simulations_files/figure-html/unnamed-chunk-5-3.png
docs/articles/docs/simulations_files/figure-html/unnamed-chunk-5-4.png
docs/articles/docs/simulations_files/figure-html/unnamed-chunk-5-5.png
docs/articles/docs/simulations_files/figure-html/unnamed-chunk-5-6.png
docs/articles/docs/simulations_files/figure-html/unnamed-chunk-6-1.png
docs/articles/docs/simulations_files/figure-html/unnamed-chunk-7-1.png
docs/articles/docs/simulations_files/figure-html/unnamed-chunk-8-1.png
docs/articles/docs/simulations_files/figure-html/unnamed-chunk-9-1.png
docs/articles/index.html
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/bdg.estimate.html
docs/reference/bdg.islands.html
docs/reference/bdg.metanet.html
docs/reference/blanket.add.modpairs.html
docs/reference/blanket.add.mods.html
docs/reference/blanket.cred.html
docs/reference/blanket.inform.html
docs/reference/blanket.lift.html
docs/reference/blanket.new.html
docs/reference/build.workflow.html
docs/reference/check.sft.html
docs/reference/eig.exp.html
docs/reference/eig.get.html
docs/reference/filter.var.html
docs/reference/fuzzy.mods.html
docs/reference/fuzzy.plot.html
docs/reference/fuzzy.predict.html
docs/reference/graph.similarity.html
docs/reference/index.html
docs/reference/keep.var.html
docs/reference/me.get.html
docs/reference/metanet.build.html
docs/reference/mm.get.html
docs/reference/mm.merged.html
docs/reference/mod.plot.html
docs/reference/model.edges.html
docs/reference/model.er.html
docs/reference/model.ff.html
docs/reference/model.hpa.html
docs/reference/model.kd.html
docs/reference/model.layout.html
docs/reference/model.mer.html
docs/reference/model.mpa.html
docs/reference/model.pa.html
docs/reference/model.plot.html
docs/reference/model.rename.html
docs/reference/model.sim.html
docs/reference/model.similarity.html
docs/reference/model.simplify.html
docs/reference/model.sw.html
docs/reference/models.plot.html
docs/reference/models.similarity.html
docs/reference/mods.detect.html
docs/reference/mods.get.html
docs/reference/mods.plot.html
docs/reference/plt.graph.html
docs/reference/plt.graphs.html
docs/reference/plt.hierarchy.html
docs/reference/plt.soft.html
docs/reference/prior.soften.html
docs/reference/pvector.html
docs/reference/rank.var.html
docs/reference/rcolors.html
docs/reference/select.var.html
docs/reference/sft.check.html
docs/reference/sft.plot.html
docs/reference/sim.graph.html
docs/reference/sim.graphs.html
docs/reference/string.edges.html
docs/reference/toy.html
docs/sitemap.xml
inst/extdata/models.rds
man/bdg.estimate.Rd
man/bdg.islands.Rd
man/bdg.metanet.Rd
man/blanket.cred.Rd
man/blanket.inform.Rd
man/blanket.lift.Rd
man/blanket.new.Rd
man/eig.exp.Rd
man/eig.get.Rd
man/fuzzy.mods.Rd
man/fuzzy.plot.Rd
man/fuzzy.predict.Rd
man/keep.var.Rd
man/me.get.Rd
man/mm.get.Rd
man/mm.merged.Rd
man/mod.plot.Rd
man/model.edges.Rd
man/model.er.Rd
man/model.ff.Rd
man/model.hpa.Rd
man/model.kd.Rd
man/model.layout.Rd
man/model.mer.Rd
man/model.mpa.Rd
man/model.pa.Rd
man/model.plot.Rd
man/model.rename.Rd
man/model.sim.Rd
man/model.similarity.Rd
man/model.simplify.Rd
man/model.sw.Rd
man/models.plot.Rd
man/models.similarity.Rd
man/mods.detect.Rd
man/mods.plot.Rd
man/pvector.Rd
man/rank.var.Rd
man/rcolors.Rd
man/sft.check.Rd
man/sft.plot.Rd
man/toy.Rd
pkgdown/_pkgdown.yml
tests/testthat.R
tests/testthat/test-learning.R
vignettes/docs/constraints.Rmd
vignettes/docs/filtering.Rmd
vignettes/docs/learning.Rmd
vignettes/docs/simulations.Rmd