rank.var: Rank variables by median absolute deviation across one or...
In montilab/shine: Structure Learning for Hierarchical Networks

Rank variables by median absolute deviation across one or more subtypes

rank.var(
  eset,
  column,
  subtypes,
  limit = 2500,
  genes = rownames(eset),
  fn = mad
)

`eset`	An expression set object
`column`	The column in pData where subtypes are described
`subtypes`	One or more unique subtypes
`limit`	Number of genes to select
`genes`	Allowed genes
`fn`	A function to rank variables by

A vector of genes

montilab/shine documentation built on May 20, 2021, 4:22 p.m.

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