Man pages for mottensmann/DBChecks
Checking Database
| accipiter_age | Estimate the age of juvenile goshawks based on wing length |
| assign_region | Assign nest to natural region |
| birdinfo | Summarise all data from specific individual |
| buffer.coords | buffer around point |
| buteo_age | Estimate the age of juvenile buzzards based on wing length |
| buteo_condition | residual weight with respect to a regression of wing length... |
| check.breeders | Check for if breeders were not resighted |
| check.buzzard_db | Checking buzzard_db |
| check.dupl | Identifies and returns duplicated characters |
| check.overdisp | Checks for overdispersion in model fits |
| check.resights | Check for duplicated resights |
| CheckRing | Check the format of a RING database |
| check.tag | Identify to which of multiple possible individuals are... |
| check.tag.milvus | Identify to which of multiple possible individuals are... |
| compare.df | Compare DFs |
| coord2shape | Create shape for a single coordinate |
| create.ch | Create live encounter History for CJS model |
| create.dl | Create Dead and live encounter History (LDLD ...) for Burnham... |
| df2shape | Create shape file using data frame as input |
| digitize_graph | Digitize graphs using package digitize |
| dir2nest | Dir2Nest |
| dist2centroid | Distance between Nest and territory centroid |
| dist2nest | Dist2Nest |
| doy | Julian Day for any date |
| export2ring | Export ringing data for exchange with the Vogelwarte... |
| file.select | Select most recent version of a file |
| FledgeFromHatch | Calculate Fledging date for hatching date |
| get.geno | Get genotype table for focal individual |
| gpx.add | Add nest ID where missing to ringing list |
| gpx.filt | Filter GPX formatted waypoint data |
| gpx.get | Get corresponding GPX waypoint for a pair of coordinates |
| habitat.analysis | Habitat analysis |
| k.means | K-means |
| k.nearest.distr | K-nearest neighbour distribution |
| meancoordinates | Wrapper to use QGIS native:meancoordinates function |
| milvus_age | Estimate the age of juvenile Red Kite based on wing length |
| Mode | Mode: Calculates the mode of a vector |
| nearest.features | Habitat analysis: Nearest features |
| nearest.neighbour | next neighbour |
| passer2ring | Create RING database for Passer domesticus ringing data |
| PlaceInfo | Get Location info |
| polygonise_territories | Polygonize territories |
| pool.shapes | Pool shapes |
| ReadFormTools.xlsx | Format FormTools output |
| remove.dupl.resight | remove duplicated entries and discard unknown individuals |
| resight.report | Report of resightings |
| resights.report.all | Report on all individuals ever reported by a observer |
| seasons | Grouping dates into seasons |
| shannon | Shannon Diversity index |
| source.rmd | Render Rmd in script |
| summary_stats | Summarise data frames |
| temp.shp | Temporary shape file name |
| unlink.shp | Remove temporary shape files |
