compute_cox_pv: Calculate p-values associated with survival analyses
In mpetrier/ector: Ectopic gene expression in cancer
Description
This function calculates, for each gene, the Cox and logrank p-values and the hazard ratio from survival analyses
Usage
1
compute_cox_pv(d, e, idx_c, idx_n, thresh_func = ector::m3sd)
Arguments
d
a transcriptomic dataset
e
a clinical dataset
idx_c
a vector of ID of cancerous patients
idx_n
a vector of ID of normal patients
thresh_func
the function used to determine the threshold
mpetrier/ector documentation built on April 4, 2020, 3:59 p.m.
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Description
This function calculates, for each gene, the Cox and logrank p-values and the hazard ratio from survival analyses
Usage
1 | compute_cox_pv(d, e, idx_c, idx_n, thresh_func = ector::m3sd)
|
Arguments
d |
a transcriptomic dataset |
e |
a clinical dataset |
idx_c |
a vector of ID of cancerous patients |
idx_n |
a vector of ID of normal patients |
thresh_func |
the function used to determine the threshold |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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