Files in mponce0/covid19.analytics
Load and Analyze Live Data from the COVID-19 Pandemic
.github/workflows/codecov.yml
.github/workflows/lintr.yml
.github/workflows/r.yml
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/aux_geos.R
R/aux_stats.R
R/aux_utils.R
R/covid19.R
R/covid19_Canada.R
R/covid19_anal.R
R/covid19_checks.R
R/covid19_dashboard-wrapper.R
R/covid19_dashboard.R
R/covid19_genomic.R
R/covid19_models.R
R/covid19_plts.R
R/covid19_print.R
R/covid19_rollingEstimates.R
R/covid19_seq.R
R/covid19_trends.R
R/covid19_vaccination_testing.R
R/pandemics.R
README.md
__codecov.yml
_config.yml
inst/CITATION
inst/extdata/02-01-2021.csv.RDS
inst/extdata/Coronaviridae_runs.csv
inst/extdata/Coronaviridae_runs.csv.rds
inst/extdata/GCF_009858895.2_ASM985889v3_genomic.gff.gz
inst/extdata/NC_045512.2.rds
inst/extdata/README.txt
inst/extdata/bckups/03-27-2020.csv
inst/extdata/bckups/04-23-2020.csv
inst/extdata/bckups/05-01-2020.csv
inst/extdata/bckups/07-04-2020.csv
inst/extdata/bckups/09-15-2020.csv.RDS
inst/extdata/c19.fasta
inst/extdata/covid19_Toronto.xlsx
inst/extdata/covid19_openData_Toronto.RDS
inst/extdata/cv19tree.rds
inst/extdata/latest.RDS
inst/extdata/pandemics.RDS
inst/extdata/pandemics_vaccines.RDS
inst/extdata/scripts/update_DS.sh
inst/extdata/sequences-nucleotides-10951-2020jul19.rds
inst/extdata/sequences-nucleotides.rds
inst/extdata/sequences-nucleotides_11142-fasta.rds
inst/extdata/sequences-nucleotides_11142.rds
inst/extdata/sequences-proteins.rds
inst/extdata/sequences-proteins_115327-2020jul19.rds
inst/extdata/sequences-proteins_117619-fasta.rds
inst/extdata/sequences-proteins_117619.rds
inst/extdata/time_series_19-covid-Confirmed.csv.RDS
inst/extdata/time_series_19-covid-Deaths.csv.RDS
inst/extdata/time_series_19-covid-Recovered.csv.RDS
inst/extdata/time_series_covid19_confirmed_US.csv.RDS
inst/extdata/time_series_covid19_confirmed_global.csv.RDS
inst/extdata/time_series_covid19_deaths_US.csv.RDS
inst/extdata/time_series_covid19_deaths_global.csv.RDS
inst/extdata/time_series_covid19_recovered_global.csv.RDS
man/figures/Germany_totals.pdf
man/figures/Germany_totals.png
man/figures/Hubei_totals.pdf
man/figures/Hubei_totals.png
man/figures/Italy_totals.pdf
man/figures/Italy_totals.png
man/figures/Japan_confirmed.pdf
man/figures/Japan_confirmed.png
man/figures/Japan_deaths.pdf
man/figures/Japan_deaths.png
man/figures/Japan_recovered.pdf
man/figures/Japan_recovered.png
man/figures/Ontario_recovered.pdf
man/figures/Ontario_recovered.png
man/figures/Ontario_totals.pdf
man/figures/Ontario_totals.png
man/figures/SIR-model-Canada.pdf
man/figures/SIR-model-Germany.pdf
man/figures/SIR-model-Ontario.pdf
man/figures/changes-per-day-1.pdf
man/figures/changes-per-day-2.pdf
man/figures/covid19-SummaryReport.pdf
man/figures/covid19-SummaryReport.txt
man/figures/gr-changes_Canada.pdf
man/figures/gr-changes_Canada.png
man/figures/gr-changes_Germany.pdf
man/figures/gr-changes_Germany.png
man/figures/gr-changes_Hubei.pdf
man/figures/gr-changes_Hubei.png
man/figures/gr-changes_Italy.pdf
man/figures/gr-changes_Italy.png
man/figures/heatmap-changes.pdf
man/figures/heatmap-growthRate.pdf
man/figures/itrends_ex.html
man/figures/livemap.html
man/figures/report-summ-TSconfirmed.pdf
man/figures/report-summ-agg.pdf
man/figures/totals-all.html
man/figures/totals.html
man/figures/trendTor.pdf
man/figures/world.SIR.model.html
tests/testthat.R
tests/testthat/covid19_checks_tests.R
tests/testthat/test_examples.R
vignettes/covid19.analytics.Rmd
vignettes/man
