Man pages for mqzhanglab/wHC
Goodness of fit Statistics Calculation based on weighted p-values
| cal_cdf | This function calculates the weighted-pvalues. |
| cmh_cal | cmh_cal is the function of the cmh test for single genes with... |
| find_rank | This function calculates the ranks of a vector based on... |
| get_centrality | get_centrality match the centrality prior information to the... |
| get_gene_expression | This function get gene expression data of specific tissues... |
| get_gene_length | This function estimates the transcripts length. |
| get_genic_intolerance | This function pull down the genic intolerance information |
| gof_cal | This function calculates the goodness-of-fit tests |
| hc_cal | This function calculates the higher criticism |
| match_prior_info | match_prior_info match the prior information to the given... |
| match_prior_info_centrality | match_prior_info_centrality matches the centrality prior... |
| pval_ss_cal | pval_ss_cal calculates pvalues of each genes between disease... |
| rawp_cal | This function calculates the impirical raw p-values. |
| sdminp | This function calculates the Step Down minP method. |
| sdminp_fdr | This function calculates the Step Down minP and report the... |
| strat_score_cal_glm | strat_score_cal_glm calculates the population stratification |
| support_gtex_tissue | support_gtex_tissue provides supported option for "tissue" in... |
| trans_w | This function transfers prior information into the weights |
