Man pages for mrc-ide/ZikaModel
Zika odin model
| amplitudes_phases | Amplitude and phase of seasonal forcing |
| br_brazil_age | Brazil birth rates |
| calculate_incidence | Calculate incidence |
| calculate_mean_of_patch_variables | Calculate the mean across patches of a model output |
| calculate_microcases | Estimates total number of microcephaly cases |
| calculate_microcases_baseline | Estimates baseline number of microcephaly cases |
| calculate_microcases_ZIKV | Estimates number of microcephaly cases caused by Zika... |
| cumsum_across_array_dims | Cumulative sum over array margin |
| default_demographics | Return the default demographic information |
| deterministic_model | Deterministic model creation |
| equilibrium_init_create | Generate equilibrium state |
| format_output_H | Format human model outputs |
| format_output_M | Format mosquito model outputs |
| format_output_Mprop | Format mosquito proportions |
| lag_diff | Calculate lagged differences |
| lag_diff_array | Calculate lagged differences for array |
| mc_prob_ZIKV_pregn | ZIKV-induced microcephaly risk during pregancy |
| nn_links | Patches' nearest neighbors |
| parameters_deterministic_model | Create a list of parameters |
| plot.Zika_model_simulation | Plot human or mosquitoes states |
| run_deterministic_model | Run the deterministic version of the Zika model |
| sum_across_array_dims | Sum over aray margin |
