API for mrc-ide/epihawkes
Hawkes Processes model for outbreak analysis
| Global functions | |
|---|---|
| all_roots | Man page |
| compute_count_function | Man page Source code |
| compute_deriv_mu | Source code |
| compute_exp_deriv_alpha | Source code |
| compute_exp_deriv_delta | Source code |
| compute_exp_deriv_shift | Source code |
| compute_integral_limits | Man page Source code |
| compute_intensity_function | Man page Source code |
| compute_lambda | Man page Source code |
| compute_lambda_max | Source code |
| compute_ray_deriv_alpha | Source code |
| compute_ray_deriv_delta | Man page Source code |
| compute_ray_deriv_shift | Source code |
| conditional_intensity | Man page Source code |
| conditional_intensity_list | Man page Source code |
| count_less_than | Source code |
| d2L_d2A | Source code |
| d2L_d2B | Source code |
| d2L_d2M | Source code |
| d2L_d2N | Source code |
| d2L_d2alpha | Source code |
| d2L_d2delta | Source code |
| d2L_dAB | Source code |
| d2L_dAM | Source code |
| d2L_dAN | Source code |
| d2L_dAalpha | Source code |
| d2L_dAdelta | Source code |
| d2L_dBA | Source code |
| d2L_dBM | Source code |
| d2L_dBN | Source code |
| d2L_dBalpha | Source code |
| d2L_dBdelta | Source code |
| d2L_dMA | Source code |
| d2L_dMB | Source code |
| d2L_dMN | Source code |
| d2L_dMalpha | Source code |
| d2L_dMdelta | Source code |
| d2L_dNA | Source code |
| d2L_dNB | Source code |
| d2L_dNM | Source code |
| d2L_dNalpha | Source code |
| d2L_dNdelta | Source code |
| d2L_dalphaA | Source code |
| d2L_dalphaB | Source code |
| d2L_dalphaM | Source code |
| d2L_dalphaN | Source code |
| d2L_dalphadelta | Source code |
| d2L_ddeltaA | Source code |
| d2L_ddeltaB | Source code |
| d2L_ddeltaM | Source code |
| d2L_ddeltaN | Source code |
| d2L_ddeltaalpha | Source code |
| d_zeta_d_A_i | Source code |
| d_zeta_d_B_i | Source code |
| d_zeta_d_M_i | Source code |
| d_zeta_d_N_i | Source code |
| d_zeta_d_alpha_i | Source code |
| d_zeta_d_delta_i | Source code |
| deriv_A_fn | Source code |
| deriv_B_fn | Source code |
| deriv_C_fn | Source code |
| deriv_M_fn | Source code |
| deriv_N_fn | Source code |
| deriv_P_fn | Source code |
| deriv_alpha_exp_part_one | Source code |
| deriv_alpha_ray_part_one | Source code |
| deriv_delta_exp_part_one | Source code |
| deriv_delta_exp_part_two | Source code |
| deriv_delta_ray_part_one | Source code |
| deriv_delta_ray_part_two | Source code |
| deriv_shift_exp_part_one | Source code |
| deriv_shift_ray_part_one | Source code |
| eta3_ray | Source code |
| eta5_ray | Source code |
| exp_derivatives | Man page Source code |
| exp_kernel | Man page Source code |
| exp_kernel_titj | Source code |
| find_zero_mu_sinusoidal_linear_turning_points | Man page Source code |
| find_zero_mu_turning_points | Man page Source code |
| hawkes_simulation | Man page Source code |
| int_exp | Man page Source code |
| int_ray | Man page Source code |
| integral_intensity | Man page Source code |
| max_lambda | Man page Source code |
| max_mu | Man page Source code |
| mu_constant | Man page Source code |
| mu_diff_constant | Man page Source code |
| mu_diff_linear | Man page Source code |
| mu_diff_none | Man page Source code |
| mu_diff_quadratic | Man page Source code |
| mu_diff_sinusoidal | Man page Source code |
| mu_diff_sinusoidal_constant | Man page Source code |
| mu_diff_sinusoidal_linear | Man page Source code |
| mu_diff_sinusoidal_linear_period | Man page Source code |
| mu_int_constant | Man page Source code |
| mu_int_linear | Man page Source code |
| mu_int_none | Man page Source code |
| mu_int_quadratic | Man page Source code |
| mu_int_sinusoidal | Man page Source code |
| mu_int_sinusoidal_constant | Man page Source code |
| mu_int_sinusoidal_linear | Man page Source code |
| mu_int_sinusoidal_linear_period | Man page Source code |
| mu_linear | Man page Source code |
| mu_none | Man page Source code |
| mu_quadratic | Man page Source code |
| mu_sinusoidal | Man page Source code |
| mu_sinusoidal_constant | Man page Source code |
| mu_sinusoidal_linear | Man page Source code |
| mu_sinusoidal_linear_period | Man page Source code |
| neg_log_likelihood | Man page Source code |
| plot_decay_kernel | Man page Source code |
| plot_events | Man page Source code |
| plot_intensity | Man page Source code |
| plot_intensity_imported | Man page Source code |
| print_message | Man page Source code |
| ray_derivatives | Man page Source code |
| ray_hessian | Man page Source code |
| ray_kernel | Man page Source code |
| ray_kernel_diff | Source code |
| ray_kernel_titj | Source code |
| ray_kernel_titj1 | Source code |
| ray_kernel_titj2 | Source code |
| ray_kernel_titj_shift | Source code |
| simulate_next_event | Man page Source code |
| term_one_log_likelihood | Source code |
| top_fn_exp | Source code |
| top_fn_exp_shift | Source code |
| top_fn_ray | Source code |
| top_fn_ray_shift | Source code |
| zeta_fn_i | Source code |
