plot_intensity: Plot force of infection
In mrc-ide/epihawkes: Hawkes Processes model for outbreak analysis

Description Usage Arguments Value Examples

Plot force of infection

plot_intensity(
  events,
  T_max,
  kernel,
  parameters,
  mu_fn = mu_none,
  parent_indexes = NULL
)

`events`	List of event times
`T_max`	Maximum time to plot
`kernel`	Kernel
`parameters`	Parameters of the Hawkes kernel
`mu_fn`	Function for exogenous intensity (some examples are given in R/mu.R)
`parent_indexes`	Index of parent if known

Plot of force of infection.

plot_intensity(events = c(0, 2, 5, 6, 7), T_max = 10, kernel = exp_kernel,
    parameters = list("alpha" = 1, "delta" = 1, "delay" = 0))
plot_intensity(events = c(0, 2, 5, 6, 7), T_max = 10, kernel = ray_kernel,
    parameters = list("alpha" = 1, "delta" = 1, "delay" = 0))
plot_intensity(events = c(0, 2, 5, 6, 7), T_max = 10, kernel = ray_kernel,
    parameters = list("alpha" = 1, "delta" = 1, "delay" = 5))