API for mrc-ide/genescaper
Allele frequency mapping and outlier detection
| Global functions | |
|---|---|
| %>% | Man page |
| .onUnload | Source code |
| Bejamini_Yekutieli | Source code |
| GeoMAPI_analysis | Man page Source code |
| GeoMAPI_assign_edges | Man page Source code |
| GeoMAPI_assign_edges_cpp | Source code |
| GeoMAPI_get_significant | Man page Source code |
| GeoMAPI_plot_coverage | Man page Source code |
| GeoMAPI_plot_zscore | Man page Source code |
| GeoMAPI_suggest_eccentricity | Man page Source code |
| Wombling | Man page Source code |
| Wombling_get_significant | Man page Source code |
| assert_2d | Source code |
| assert_NA | Source code |
| assert_atomic | Source code |
| assert_bounded | Source code |
| assert_class | Source code |
| assert_cpp_int | Source code |
| assert_dataframe | Source code |
| assert_decreasing | Source code |
| assert_dim | Source code |
| assert_eq | Source code |
| assert_file_exists | Source code |
| assert_gr | Source code |
| assert_greq | Source code |
| assert_in | Source code |
| assert_increasing | Source code |
| assert_int | Source code |
| assert_le | Source code |
| assert_length | Source code |
| assert_leq | Source code |
| assert_limit | Source code |
| assert_list | Source code |
| assert_list_named | Source code |
| assert_logical | Source code |
| assert_matrix | Source code |
| assert_matrix_numeric | Source code |
| assert_named | Source code |
| assert_ncol | Source code |
| assert_neq | Source code |
| assert_noduplicates | Source code |
| assert_non_NA | Source code |
| assert_non_null | Source code |
| assert_not_in | Source code |
| assert_nrow | Source code |
| assert_null | Source code |
| assert_numeric | Source code |
| assert_pos | Source code |
| assert_pos_cpp_int | Source code |
| assert_pos_int | Source code |
| assert_same_length | Source code |
| assert_same_length_multiple | Source code |
| assert_single | Source code |
| assert_single_bounded | Source code |
| assert_single_cpp_int | Source code |
| assert_single_int | Source code |
| assert_single_logical | Source code |
| assert_single_numeric | Source code |
| assert_single_pos | Source code |
| assert_single_pos_cpp_int | Source code |
| assert_single_pos_int | Source code |
| assert_single_string | Source code |
| assert_square_matrix | Source code |
| assert_string | Source code |
| assert_symmetric_matrix | Source code |
| assert_vector | Source code |
| assert_vector_bounded | Source code |
| assert_vector_int | Source code |
| assert_vector_logical | Source code |
| assert_vector_numeric | Source code |
| assert_vector_pos | Source code |
| assert_vector_pos_int | Source code |
| assert_vector_string | Source code |
| bind_data | Man page Source code |
| calc_pairwise_D | Source code |
| calc_pairwise_Gst | Source code |
| col_hotcold | Man page Source code |
| create_hex_grid | Man page Source code |
| define_model | Man page Source code |
| force_vector | Source code |
| genescaper | Man page |
| genescaper_project | Man page Source code |
| get_GC_distance | Man page Source code |
| get_ellipse | Man page Source code |
| get_merged_poly | Source code |
| get_mu_sigsq_credible | Man page Source code |
| get_pairwise_D | Man page Source code |
| get_pairwise_Gst | Man page Source code |
| get_summaries | Source code |
| log_one_minus | Source code |
| log_sum | Source code |
| log_sum2 | Source code |
| lonlat_to_bearing | Man page Source code |
| matrix_to_rcpp | Source code |
| nice_format | Source code |
| null_map_cpp | Source code |
| null_site_cpp | Source code |
| pairwise_to_mat | Source code |
| plot_pairwise | Man page Source code |
| plot_spatial_autocor | Man page Source code |
| post_sigsq_mu | Source code |
| predict_map | Man page Source code |
| predict_map_cpp | Source code |
| predict_pairwise | Man page Source code |
| print.genescaper_project | Source code |
| run_mcmc | Man page Source code |
| sim_GRF | Man page Source code |
| sim_wrightfisher | Man page Source code |
| sim_wrightfisher_cpp | Source code |
| stat_sim | Source code |
| summary.genescaper_project | Source code |
| transform_p_to_z | Source code |
| transform_z_to_p | Source code |
| update_progress | Source code |
