AL_params | Preset parameters for the AL drug |
arab_params | Preset parameters for the An. arabiensis vector |
calculate_carrying_capacity | Calculate the vector carrying capacity |
CorrelationParameters | Class: Correlation parameters |
create_pev_profile | create a PEV profile |
create_progress_process | Create progress process |
DHA_PQP_params | Preset parameters for the DHA-PQP drug |
find_birthrates | Calculate the birthrate for a population in equilibrium |
fun_params | Preset parameters for the An. funestus vector |
gamb_params | Preset parameters for the An. gambiae s.s vector |
get_antimalarial_resistance_parameters | Retrieve resistance parameters |
get_correlation_parameters | Get default correlation parameters |
get_init_carrying_capacity | Get initialised carrying capacity for each species |
get_parameters | Get model parameters |
parameter_draws | Parameter draws |
parameterise_mosquito_equilibrium | Parameterise total_M and carrying capacity for mosquitos from... |
parameterise_total_M | Parameterise total_M |
peak_season_offset | Calculate the yearly offset (in timesteps) for the peak... |
r21_booster_profile | R21 booster vaccine profile |
r21_profile | R21 vaccine profile |
rtss_booster_profile | RTS,S booster vaccine profile |
rtss_profile | RTS,S vaccine profile |
run_metapop_simulation | Run a metapopulation model |
run_resumable_simulation | Run the simulation in a resumable way |
run_simulation | Run the simulation |
run_simulation_with_repetitions | Run the simulation with repetitions |
set_antimalarial_resistance | Parameterise antimalarial resistance |
set_bednets | Parameterise a bed net strategy |
set_carrying_capacity | Parameterise custom baseline carrying capacity |
set_clinical_treatment | Parameterise clinical treatment |
set_demography | Parameterise variable deathrates |
set_drugs | Parameterise drugs to use in the model |
set_epi_outputs | Parameterise age grouped output rendering |
set_equilibrium | Set equilibrium |
set_mass_pev | Parameterise a vaccine mass distribution strategy |
set_mda | Parameterise a Mass Drug Administration |
set_parameter_draw | Use parameter draw from the join posterior |
set_pev_epi | Parameterise a pre-erythrocytic vaccine with an EPI strategy |
set_pmc | Parameterise a perennial malaria chemoprevention (PMC,... |
set_smc | Parameterise a Seasonal Malaria Chemoprevention |
set_species | Parameterise the mosquito species to use in the model |
set_spraying | Parameterise an indoor spraying strategy |
set_tbv | Parameterise an TBV strategy |
SP_AQ_params | Preset parameters for the SP-AQ drug |
steph_params | Preset parameters for the An. stephensi vector |
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